Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d036054_P001 | Maize | cytosol, nucleus, plastid | 97.75 | 97.75 |
| KXG37384 | Sorghum | mitochondrion, nucleus | 83.15 | 97.37 |
| PGSC0003DMT400046771 | Potato | mitochondrion, nucleus | 82.58 | 96.71 |
| EER98036 | Sorghum | mitochondrion, nucleus | 82.02 | 96.05 |
| TraesCS2A01G247700.1 | Wheat | nucleus | 81.46 | 95.39 |
| Solyc03g113100.2.1 | Tomato | mitochondrion, nucleus | 81.46 | 95.39 |
| GSMUA_Achr2P16860_001 | Banana | endoplasmic reticulum, golgi | 83.15 | 76.29 |
| EER89829 | Sorghum | cytosol | 35.39 | 42.57 |
| KXG33034 | Sorghum | cytosol | 34.83 | 42.18 |
| EES19701 | Sorghum | cytosol | 34.83 | 41.89 |
| EES13053 | Sorghum | cytosol | 34.83 | 41.89 |
| EES01663 | Sorghum | cytosol, nucleus, peroxisome | 34.83 | 41.89 |
| KXG29317 | Sorghum | nucleus | 33.71 | 40.54 |
| EER98641 | Sorghum | cytosol | 33.15 | 39.86 |
| KXG35379 | Sorghum | cytosol | 33.15 | 38.56 |
| EES03421 | Sorghum | cytosol | 32.58 | 37.91 |
| EER97436 | Sorghum | plastid | 24.72 | 23.53 |
Protein Annotations
| MapMan:19.2.2.1.4 | Gene3D:3.10.110.10 | UniProt:A0A1B6Q1B5 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016740 | InterPro:IPR000608 | InterPro:IPR016135 | EnsemblPlants:KXG31665 |
| ProteinID:KXG31665 | ProteinID:KXG31665.1 | PFAM:PF00179 | ScanProsite:PS00183 | PFscan:PS50127 | PANTHER:PTHR43898 |
| PANTHER:PTHR43898:SF8 | MetaCyc:PWY-7511 | SMART:SM00212 | EnsemblPlantsGene:SORBI_3003G039200 | SUPFAM:SSF54495 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI00081ACB1C | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:3673463..3676015
Molecular Weight (calculated)
20060.9 Da
IEP (calculated)
6.249
GRAVY (calculated)
-0.354
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAPIHQFCC GFVRSVVLVV TAGHPGMSTP ARKRLMRDFK RLMQDPPAGI SGAPQDNNIM LWNAVIFGPD DTPWDGGTFK LTLQFNEEYP NKPPTVRFVS
101: RMFHPNIYAD GSICLDILQN QWSPIYDVAA ILTSIQSLLC DPNPNSPANS EAARMFSENK REYNRKVREV VEQSWTAD
101: RMFHPNIYAD GSICLDILQN QWSPIYDVAA ILTSIQSLLC DPNPNSPANS EAARMFSENK REYNRKVREV VEQSWTAD
001: MSTPARKRLM RDFKRLQQDP PAGISGAPQD NNIMLWNAVI FGPDDTPWDG GTFKLSLQFS EDYPNKPPTV RFVSRMFHPN IYADGSICLD ILQNQWSPIY
101: DVAAILTSIQ SLLCDPNPNS PANSEAARMF SESKREYNRR VREVVEQSWT AD
101: DVAAILTSIQ SLLCDPNPNS PANSEAARMF SESKREYNRR VREVVEQSWT AD
Arabidopsis Description
UBC2UBC2 [Source:UniProtKB/TrEMBL;Acc:A0A178W0U6]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.