Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029076.1-P | Field mustard | cytosol | 80.43 | 100.0 |
| CDY49174 | Canola | cytosol | 80.43 | 100.0 |
| CDY47067 | Canola | cytosol | 80.43 | 100.0 |
| CDX96210 | Canola | cytosol | 80.43 | 100.0 |
| CDY35636 | Canola | cytosol | 79.89 | 99.32 |
| CDY14388 | Canola | cytosol | 79.89 | 99.32 |
| AT5G53300.1 | Thale cress | cytosol, nucleus, peroxisome | 79.35 | 98.65 |
| Solyc08g008220.2.1 | Tomato | cytosol | 78.26 | 97.3 |
| Solyc05g050230.2.1 | Tomato | cytosol | 78.26 | 97.3 |
| PGSC0003DMT400084207 | Potato | cytosol | 78.26 | 97.3 |
| PGSC0003DMT400014816 | Potato | cytosol | 78.26 | 97.3 |
| CDY34409 | Canola | cytosol | 76.63 | 95.27 |
| CDY25571 | Canola | cytosol | 76.63 | 95.27 |
| CDY51965 | Canola | cytosol | 69.57 | 86.49 |
| CDY17396 | Canola | cytosol | 69.57 | 86.49 |
| CDX76970 | Canola | cytosol | 69.02 | 85.81 |
| CDX71304 | Canola | cytosol, mitochondrion, nucleus | 67.39 | 83.78 |
| CDY68877 | Canola | cytosol, mitochondrion | 72.28 | 83.12 |
| CDY06521 | Canola | cytosol, plastid | 72.28 | 83.12 |
| CDY31408 | Canola | cytosol | 66.85 | 83.11 |
| CDY02238 | Canola | cytosol | 64.67 | 80.41 |
| CDX89747 | Canola | cytosol | 64.13 | 79.73 |
| CDY08368 | Canola | cytosol | 67.93 | 78.62 |
| CDY11958 | Canola | cytosol | 72.83 | 77.46 |
| CDY38184 | Canola | cytosol | 70.11 | 71.67 |
| CDY39254 | Canola | cytosol | 44.02 | 69.83 |
| CDY36778 | Canola | cytosol | 72.28 | 61.29 |
| CDY23674 | Canola | cytosol | 35.87 | 59.46 |
| CDX73346 | Canola | cytosol | 35.87 | 59.46 |
| CDY37098 | Canola | cytosol | 35.33 | 58.56 |
| CDY06520 | Canola | cytosol | 45.65 | 54.19 |
| CDY40025 | Canola | cytosol | 40.22 | 48.37 |
| CDX81788 | Canola | cytosol | 39.67 | 47.71 |
| CDY35126 | Canola | cytosol | 39.67 | 47.71 |
| CDY65274 | Canola | cytosol | 37.5 | 47.26 |
| CDX96802 | Canola | cytosol | 39.13 | 47.06 |
| CDY54372 | Canola | cytosol | 39.13 | 47.06 |
| CDX83936 | Canola | cytosol | 39.13 | 47.06 |
| CDX87428 | Canola | cytosol | 38.59 | 46.41 |
| CDX88485 | Canola | cytosol | 38.59 | 46.41 |
| CDY14587 | Canola | cytosol | 38.59 | 46.1 |
| CDY26882 | Canola | cytosol | 35.87 | 45.52 |
| CDY30726 | Canola | mitochondrion, nucleus | 36.41 | 44.67 |
| CDY66232 | Canola | mitochondrion, nucleus | 36.41 | 44.67 |
| CDY57941 | Canola | cytosol | 37.5 | 44.52 |
| CDY39315 | Canola | mitochondrion | 34.78 | 42.11 |
| CDY38761 | Canola | mitochondrion | 34.78 | 42.11 |
| CDY11654 | Canola | mitochondrion | 34.78 | 42.11 |
| CDX79272 | Canola | cytosol | 37.5 | 40.59 |
| CDY03040 | Canola | mitochondrion, nucleus | 30.98 | 40.43 |
| CDX84034 | Canola | nucleus | 21.74 | 37.38 |
| CDY59253 | Canola | mitochondrion | 36.96 | 37.16 |
| CDY23617 | Canola | plastid | 36.96 | 37.16 |
| CDY68969 | Canola | mitochondrion | 28.26 | 35.86 |
| CDX73344 | Canola | cytosol | 29.89 | 33.54 |
| CDX96859 | Canola | mitochondrion | 33.15 | 32.28 |
Protein Annotations
| MapMan:19.2.2.5.2 | Gene3D:3.10.110.10 | GO:A0A078IWH5 | UniProt:A0A078IWH5 | EnsemblPlants:CDY54342 | ProteinID:CDY54342 |
| ProteinID:CDY54342.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0016740 | EnsemblPlantsGene:GSBRNA2T00013907001 | InterPro:IPR000608 | InterPro:IPR016135 | PFAM:PF00179 | ScanProsite:PS00183 |
| PFscan:PS50127 | PANTHER:PTHR24068 | PANTHER:PTHR24068:SF68 | MetaCyc:PWY-7511 | SMART:SM00212 | SUPFAM:SSF54495 |
| InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD | UniPathway:UPA00143 | UniParc:UPI0004EED3D8 | : |
Description
BnaC03g14940DBnaC03g14940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IWH5]
Coordinates
chrLK033306:-:41577..43109
Molecular Weight (calculated)
20773.2 Da
IEP (calculated)
7.808
GRAVY (calculated)
-0.124
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKRILKEL KDLQKDPPTS CSAVSMFRFC DLSECRSCNS IWDLVLVNQR FVLMSLLLNG PVAEDMFHWQ ATIMGPTDSP YAGGVFLVTI HFPPDYPFKP
101: PKVAFRTKVF HPNINSNGSI CLDILKEQWS PALTISKVLL SICSLLTDPN PDDPLVPEIA HMYKTDKNKY ESTARSWTQK YAMG
101: PKVAFRTKVF HPNINSNGSI CLDILKEQWS PALTISKVLL SICSLLTDPN PDDPLVPEIA HMYKTDKNKY ESTARSWTQK YAMG
001: MASKRILKEL KDLQKDPPTS CSAVDNASKL LVLIELEDCC RRFSNCSCIL LLEKSQDIAM AHVLLCPVAE DMFHWQATIM GPSDSPYSGG VFLVTIHFPP
101: DYPFKPPKVA FRTKVFHPNV NSNGSICLDI LKEQWSPALT ISKVLLSICS LLTDPNPDDP LVPEIAHMYK TDRAKYESTA RSWTQKYAMG
101: DYPFKPPKVA FRTKVFHPNV NSNGSICLDI LKEQWSPALT ISKVLLSICS LLTDPNPDDP LVPEIAHMYK TDRAKYESTA RSWTQKYAMG
Arabidopsis Description
UBC28Ubiquitin-conjugating enzyme 28 [Source:UniProtKB/TrEMBL;Acc:F4I5B8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.