Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- plastid 1
- mitochondrion 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr1P04790_001 | Banana | cytosol | 98.69 | 98.69 |
GSMUA_Achr4P31050_001 | Banana | cytosol | 44.44 | 89.47 |
GSMUA_Achr6P26870_001 | Banana | cytosol | 88.24 | 88.24 |
GSMUA_Achr9P06450_001 | Banana | cytosol | 97.39 | 86.13 |
GSMUA_Achr4P31060_001 | Banana | cytosol, extracellular | 43.79 | 81.71 |
VIT_12s0028g02220.t01 | Wine grape | extracellular | 96.08 | 79.89 |
GSMUA_Achr9P27870_001 | Banana | cytosol | 41.83 | 57.66 |
GSMUA_Achr9P28860_001 | Banana | cytosol | 39.87 | 54.95 |
GSMUA_Achr1P16460_001 | Banana | cytosol, nucleus, vacuole | 32.03 | 54.44 |
GSMUA_Achr3P26650_001 | Banana | cytosol, mitochondrion, peroxisome | 49.02 | 50.68 |
GSMUA_Achr9P05290_001 | Banana | cytosol | 49.02 | 50.68 |
GSMUA_Achr8P27940_001 | Banana | cytosol | 49.02 | 50.68 |
GSMUA_Achr3P15810_001 | Banana | cytosol | 49.02 | 50.68 |
GSMUA_Achr4P15590_001 | Banana | cytosol | 48.37 | 50.0 |
GSMUA_Achr4P19400_001 | Banana | cytosol | 48.37 | 50.0 |
GSMUA_Achr9P12710_001 | Banana | cytosol | 48.37 | 50.0 |
GSMUA_Achr9P12740_001 | Banana | cytosol, nucleus, peroxisome | 47.71 | 49.32 |
GSMUA_Achr6P05720_001 | Banana | cytosol | 47.06 | 48.65 |
GSMUA_Achr7P24690_001 | Banana | cytosol | 47.06 | 48.65 |
GSMUA_Achr7P17820_001 | Banana | cytosol | 47.06 | 48.65 |
GSMUA_Achr6P36250_001 | Banana | nucleus | 46.41 | 47.97 |
GSMUA_Achr10P... | Banana | cytosol | 46.41 | 47.97 |
GSMUA_Achr4P02490_001 | Banana | cytosol | 45.75 | 47.3 |
GSMUA_Achr3P11950_001 | Banana | cytosol | 37.91 | 45.67 |
GSMUA_Achr4P10380_001 | Banana | cytosol | 47.71 | 42.69 |
GSMUA_Achr4P22180_001 | Banana | cytosol | 38.56 | 42.45 |
GSMUA_Achr4P08430_001 | Banana | mitochondrion | 47.71 | 41.01 |
GSMUA_Achr2P17510_001 | Banana | nucleus | 37.91 | 40.0 |
GSMUA_Achr6P04830_001 | Banana | cytosol, nucleus, plastid | 37.25 | 39.86 |
GSMUA_Achr6P00800_001 | Banana | nucleus | 37.25 | 39.86 |
GSMUA_Achr9P25840_001 | Banana | mitochondrion, nucleus | 37.25 | 37.5 |
GSMUA_Achr5P22400_001 | Banana | cytosol, nucleus, peroxisome | 46.41 | 33.81 |
GSMUA_Achr6P32020_001 | Banana | mitochondrion, plastid | 49.02 | 31.25 |
GSMUA_Achr2P16860_001 | Banana | endoplasmic reticulum, golgi | 38.56 | 30.41 |
GSMUA_Achr5P04210_001 | Banana | cytosol | 24.18 | 21.89 |
Protein Annotations
MapMan:19.2.2.1.4 | Gene3D:3.10.110.10 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
GO:GO:0005524 | GO:GO:0016740 | EnsemblPlantsGene:GSMUA_Achr1G27440_001 | EnsemblPlants:GSMUA_Achr1P27440_001 | EnsemblPlants:GSMUA_Achr1T27440_001 | InterPro:IPR000608 |
InterPro:IPR016135 | UniProt:M0S3K1 | PFAM:PF00179 | ScanProsite:PS00183 | PFscan:PS50127 | PANTHER:PTHR43902 |
PANTHER:PTHR43902:SF4 | SMART:SM00212 | SUPFAM:SSF54495 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_AS | InterPro:UBQ-conjugating_enzyme/RWD |
UniParc:UPI0002968B3D | : | : | : | : | : |
Description
Ubiquitin-conjugating enzyme E2 35 [Source:GMGC_GENE;Acc:GSMUA_Achr1G27440_001]
Coordinates
chr1:-:24177813..24183828
Molecular Weight (calculated)
17234.8 Da
IEP (calculated)
7.508
GRAVY (calculated)
-0.322
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MANSNLPRRI IKETQRLLSE PAPGISASPS EDNMRYFNVM ILGPSQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLSDNIARH WKTNEAEAVE TAKEWTRLYA TGA
101: LQIRTVLLSI QALLSAPNPD DPLSDNIARH WKTNEAEAVE TAKEWTRLYA TGA
001: MANSNLPRRI IKETQRLLSE PAPGISASPS EDNMRYFNVM ILGPTQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVD TAKEWTRLYA SGA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVD TAKEWTRLYA SGA
Arabidopsis Description
UBC35UBC35 [Source:UniProtKB/TrEMBL;Acc:A0A178WFI9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.