Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- plastid 1
- mitochondrion 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr1P04790_001 | Banana | cytosol | 87.28 | 98.69 |
GSMUA_Achr1P27440_001 | Banana | cytosol | 86.13 | 97.39 |
GSMUA_Achr4P31050_001 | Banana | cytosol | 39.88 | 90.79 |
GSMUA_Achr6P26870_001 | Banana | cytosol | 79.77 | 90.2 |
VIT_12s0028g02220.t01 | Wine grape | extracellular | 90.17 | 84.78 |
GSMUA_Achr4P31060_001 | Banana | cytosol, extracellular | 39.31 | 82.93 |
GSMUA_Achr9P27870_001 | Banana | cytosol | 36.42 | 56.76 |
GSMUA_Achr9P28860_001 | Banana | cytosol | 35.26 | 54.95 |
GSMUA_Achr1P16460_001 | Banana | cytosol, nucleus, vacuole | 27.75 | 53.33 |
GSMUA_Achr3P15810_001 | Banana | cytosol | 43.35 | 50.68 |
GSMUA_Achr3P26650_001 | Banana | cytosol, mitochondrion, peroxisome | 43.35 | 50.68 |
GSMUA_Achr9P05290_001 | Banana | cytosol | 43.35 | 50.68 |
GSMUA_Achr8P27940_001 | Banana | cytosol | 43.35 | 50.68 |
GSMUA_Achr4P15590_001 | Banana | cytosol | 42.2 | 49.32 |
GSMUA_Achr4P19400_001 | Banana | cytosol | 42.2 | 49.32 |
GSMUA_Achr9P12740_001 | Banana | cytosol, nucleus, peroxisome | 42.2 | 49.32 |
GSMUA_Achr9P12710_001 | Banana | cytosol | 42.2 | 49.32 |
GSMUA_Achr6P05720_001 | Banana | cytosol | 41.62 | 48.65 |
GSMUA_Achr7P24690_001 | Banana | cytosol | 41.62 | 48.65 |
GSMUA_Achr7P17820_001 | Banana | cytosol | 41.62 | 48.65 |
GSMUA_Achr6P36250_001 | Banana | nucleus | 41.04 | 47.97 |
GSMUA_Achr10P... | Banana | cytosol | 41.04 | 47.97 |
GSMUA_Achr4P02490_001 | Banana | cytosol | 40.46 | 47.3 |
GSMUA_Achr3P11950_001 | Banana | cytosol | 33.53 | 45.67 |
GSMUA_Achr4P10380_001 | Banana | cytosol | 42.2 | 42.69 |
GSMUA_Achr4P22180_001 | Banana | cytosol | 34.1 | 42.45 |
GSMUA_Achr4P08430_001 | Banana | mitochondrion | 42.2 | 41.01 |
GSMUA_Achr2P17510_001 | Banana | nucleus | 32.95 | 39.31 |
GSMUA_Achr6P04830_001 | Banana | cytosol, nucleus, plastid | 32.37 | 39.16 |
GSMUA_Achr6P00800_001 | Banana | nucleus | 32.37 | 39.16 |
GSMUA_Achr9P25840_001 | Banana | mitochondrion, nucleus | 32.37 | 36.84 |
GSMUA_Achr5P22400_001 | Banana | cytosol, nucleus, peroxisome | 41.62 | 34.29 |
GSMUA_Achr6P32020_001 | Banana | mitochondrion, plastid | 43.35 | 31.25 |
GSMUA_Achr2P16860_001 | Banana | endoplasmic reticulum, golgi | 33.53 | 29.9 |
GSMUA_Achr5P04210_001 | Banana | cytosol | 20.81 | 21.3 |
Protein Annotations
EnsemblPlants:GSMUA_Achr9P06450_001 | EnsemblPlants:GSMUA_Achr9T06450_001 | EnsemblPlantsGene:GSMUA_Achr9G06450_001 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 |
InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR43902 | PANTHER:PTHR43902:SF4 | PFAM:PF00179 | PFscan:PS50127 |
SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI000296731E | UniProt:M0TY04 | MapMan:35.1 | : |
Description
Ubiquitin-conjugating enzyme E2 35 [Source:GMGC_GENE;Acc:GSMUA_Achr9G06450_001]
Coordinates
chr9:+:4112205..4116957
Molecular Weight (calculated)
19557.6 Da
IEP (calculated)
9.382
GRAVY (calculated)
-0.387
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MANSNLPRRI IKETQRLLSE PAPGISASPS EDNMRYFNVM ILGPTQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKARRCIS SLLSFSQKNN
101: YNPRLGRICL DILKDKWSPA LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKTNEAEAVE TAKEWTRLYA SGA
101: YNPRLGRICL DILKDKWSPA LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKTNEAEAVE TAKEWTRLYA SGA
001: MANSNLPRRI IKETQRLLSE PAPGISASPS EDNMRYFNVM ILGPTQSPYE GGVFKLELFL PEEYPMAAPK VRFLTKIYHP NIDKLGRICL DILKDKWSPA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVD TAKEWTRLYA SGA
101: LQIRTVLLSI QALLSAPNPD DPLSENIAKH WKSNEAEAVD TAKEWTRLYA SGA
Arabidopsis Description
UBC35UBC35 [Source:UniProtKB/TrEMBL;Acc:A0A178WFI9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.