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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • plastid 4
  • vacuole 1
  • mitochondrion 2
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr9P05290_001 Banana cytosol 61.25 99.32
GSMUA_Achr8P27940_001 Banana cytosol 60.42 97.97
GSMUA_Achr7P24690_001 Banana cytosol 59.17 95.95
GSMUA_Achr3P15810_001 Banana cytosol 59.17 95.95
GSMUA_Achr10P... Banana cytosol 58.75 95.27
GSMUA_Achr4P15590_001 Banana cytosol 58.33 94.59
GSMUA_Achr9P28860_001 Banana cytosol 43.75 94.59
GSMUA_Achr4P02490_001 Banana cytosol 57.92 93.92
GSMUA_Achr6P05720_001 Banana cytosol 57.92 93.92
GSMUA_Achr9P12740_001 Banana cytosol, nucleus, peroxisome 56.67 91.89
GSMUA_Achr4P19400_001 Banana cytosol 55.83 90.54
GSMUA_Achr6P36250_001 Banana nucleus 55.0 89.19
GSMUA_Achr3P26650_001 Banana cytosol, mitochondrion, peroxisome 55.0 89.19
GSMUA_Achr4P10380_001 Banana cytosol 62.5 87.72
GSMUA_Achr7P17820_001 Banana cytosol 53.33 86.49
GSMUA_Achr9P27870_001 Banana cytosol 39.58 85.59
GSMUA_Achr4P08430_001 Banana mitochondrion 63.33 85.39
GSMUA_Achr9P12710_001 Banana cytosol 52.5 85.14
GSMUA_Achr1P16460_001 Banana cytosol, nucleus, vacuole 31.67 84.44
GSMUA_Achr3P11950_001 Banana cytosol 44.58 84.25
GSMUA_Achr5P22400_001 Banana cytosol, nucleus, peroxisome 54.58 62.38
KRG89662 Soybean endoplasmic reticulum 39.17 56.29
GSMUA_Achr4P22180_001 Banana cytosol 29.58 51.08
GSMUA_Achr4P31060_001 Banana cytosol, extracellular 17.08 50.0
GSMUA_Achr1P04790_001 Banana cytosol 31.25 49.02
GSMUA_Achr1P27440_001 Banana cytosol 31.25 49.02
GSMUA_Achr6P26870_001 Banana cytosol 29.58 46.41
GSMUA_Achr5P04210_001 Banana cytosol 31.67 44.97
GSMUA_Achr6P00800_001 Banana nucleus 26.67 44.76
GSMUA_Achr6P04830_001 Banana cytosol, nucleus, plastid 25.83 43.36
GSMUA_Achr9P06450_001 Banana cytosol 31.25 43.35
GSMUA_Achr9P25840_001 Banana mitochondrion, nucleus 27.08 42.76
GSMUA_Achr2P17510_001 Banana nucleus 25.83 42.76
GSMUA_Achr4P31050_001 Banana cytosol 12.5 39.47
GSMUA_Achr2P16860_001 Banana endoplasmic reticulum, golgi 27.08 33.51
Protein Annotations
MapMan:19.2.2.5.2Gene3D:3.10.110.10GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005524GO:GO:0016740EnsemblPlantsGene:GSMUA_Achr6G32020_001EnsemblPlants:GSMUA_Achr6P32020_001EnsemblPlants:GSMUA_Achr6T32020_001InterPro:IPR000608
InterPro:IPR016135UniProt:M0TBZ7PFAM:PF00179ScanProsite:PS00183PFscan:PS50127PANTHER:PTHR24068
PANTHER:PTHR24068:SF68SMART:SM00212SUPFAM:SSF54495InterPro:UBQ-conjugat_E2InterPro:UBQ-conjugating_ASInterPro:UBQ-conjugating_enzyme/RWD
UniParc:UPI000295DDD2SEG:seg::::
Description
Ubiquitin-conjugating enzyme E2-17 kDa [Source:GMGC_GENE;Acc:GSMUA_Achr6G32020_001]
Coordinates
chr6:+:31583122..31588651
Molecular Weight (calculated)
26619.8 Da
IEP (calculated)
10.387
GRAVY (calculated)
-0.463
Length
240 amino acids
Sequence
(BLAST)
001: MLAEGSSLSF KGRRRAKICP PWGRRPSNLN PVSGSTTSIS CSPPDSRSRA NLAAAFAFLF FPVSSSDRAR TRERKGGGNE RGRVSVERRS SFMASRRIIK
101: ELKDLQKDPP TSCSAGPVGE DMFHWQATIM GPPDSPYAGG VFLVTIHFPP DYPFKPPKVA FRTKVFHPNI NSNGSICLDI LKEQWSPALT ISKVLLSICS
201: LLTDPNPDDP LVPEIAHMYK TDRTKYETTA RSWTQRYAMG
Best Arabidopsis Sequence Match ( AT1G64230.1 )
(BLAST)
001: MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP SDSPYSGGVF LVTIHFPPDY PFKPPKVAFR TKVFHPNVNS NGSICLDILK EQWSPALTIS
101: KVLLSICSLL TDPNPDDPLV PEIAHMYKTD RAKYESTARS WTQKYAMG
Arabidopsis Description
UBC28Ubiquitin-conjugating enzyme 28 [Source:UniProtKB/TrEMBL;Acc:F4I5B8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.