Factsheet for Os01t0695300-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G258500.1	Wheat	cytosol	84.69	73.86
TraesCS3A01G258600.1	Wheat	cytosol	84.36	73.37
HORVU3Hr1G065190.1	Barley	cytosol	81.43	70.82
Os01t0703400-01	Rice	cytosol, mitochondrion	74.59	64.87
Os05t0543400-01	Rice	cytosol	71.99	62.25
Os04t0657300-00	Rice	cytosol, nucleus	3.91	60.0
Os04t0657100-01	Rice	cytosol	53.42	41.84

Protein Annotations

Gene3D:1.10.600.10	EntrezGene:4323892	MapMan:9.1.3.2	ProteinID:BAD81810.1	ProteinID:BAF05873.1	ProteinID:BAS73843.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004161	GO:GO:0004337	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008299
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0045337	InterPro:IPR008949	InterPro:Isoprenoid_synthase_dom_sf
EnsemblPlantsGene:Os01g0695300	EnsemblPlants:Os01t0695300-01	PFAM:PF00348	ScanProsite:PS00723	PANTHER:PTHR11525	PANTHER:PTHR11525:SF3
InterPro:Polyprenyl_synt	InterPro:Polyprenyl_synt_CS	UniProt:Q5N9P6	SUPFAM:SSF48576	UniParc:UPI000049E8B0	RefSeq:XP_015621772.1

Description

Similar to Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)]. (Os01t0695300-01)

Coordinates

chr1:-:28752172..28755024

Molecular Weight (calculated)

35601.7 Da

IEP (calculated)

5.516

GRAVY (calculated)

-0.224

Length

307 amino acids

Sequence
(BLAST)

001: MLDYNVLGGK LNRGLAVVES YKILKAASAT EPSEEELFLA CILGWGIEWL QAYFLVLDDI MDNSQTRRGK PCWFRLPKVG LIAINDGLVL RSQISRIFRR
101: YFRGKSYYVD LLDLFNEVEI QTTSGQLLDQ ITTNEGRKDL NKYNVHVYRR IVEYKTAYYS FYLPVACALL LFDESLDNYA QVKHILVEMG VYFQSQDDYL
201: DCFGEPEIIG KIGSDIEDFK CSWLFVQALE RADEKQKGVL FENYGKSDPA CVAKVKDLYN ELHLQRVFSE YERESYEKLI SAIEAQPNEA VRAVLKSFLH
301: KIYKRSK

Best Arabidopsis Sequence Match ( AT5G47770.1 )
(BLAST)

001: MSVSCCCRNL GKTIKKAIPS HHLHLRSLGG SLYRRRIQSS SMETDLKSTF LNVYSVLKSD LLHDPSFEFT NESRLWVDRM LDYNVRGGKL NRGLSVVDSF
101: KLLKQGNDLT EQEVFLSCAL GWCIEWLQAY FLVLDDIMDN SVTRRGQPCW FRVPQVGMVA INDGILLRNH IHRILKKHFR DKPYYVDLVD LFNEVELQTA
201: CGQMIDLITT FEGEKDLAKY SLSIHRRIVQ YKTAYYSFYL PVACALLMAG ENLENHIDVK NVLVDMGIYF QVQDDYLDCF ADPETLGKIG TDIEDFKCSW
301: LVVKALERCS EEQTKILYEN YGKPDPSNVA KVKDLYKELD LEGVFMEYES KSYEKLTGAI EGHQSKAIQA VLKSFLAKIY KRQK

Arabidopsis Description

FPS1Farnesyl pyrophosphate synthase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09152]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.