Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G258500.1 | Wheat | cytosol | 86.97 | 87.22 |
| TraesCS3A01G258600.1 | Wheat | cytosol | 86.97 | 86.97 |
| Os01t0695300-01 | Rice | cytosol | 70.82 | 81.43 |
| HORVU2Hr1G073510.1 | Barley | cytosol | 13.03 | 68.66 |
| HORVU1Hr1G079070.1 | Barley | cytosol | 60.62 | 65.05 |
| HORVU3Hr1G065960.4 | Barley | cytosol | 64.59 | 64.23 |
| HORVU7Hr1G080750.1 | Barley | endoplasmic reticulum, plasma membrane | 30.31 | 58.15 |
| HORVU6Hr1G033960.1 | Barley | endoplasmic reticulum | 29.46 | 56.52 |
| HORVU2Hr1G111540.10 | Barley | cytosol, plasma membrane | 55.24 | 56.2 |
| HORVU1Hr1G043190.1 | Barley | extracellular | 14.16 | 43.86 |
Protein Annotations
| Gene3D:1.10.600.10 | MapMan:9.1.3.2 | UniProt:A0A287LDL7 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008299 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 |
| EnsemblPlantsGene:HORVU3Hr1G065190 | EnsemblPlants:HORVU3Hr1G065190.1 | InterPro:IPR008949 | InterPro:Isoprenoid_synthase_dom_sf | PFAM:PF00348 | ScanProsite:PS00444 |
| ScanProsite:PS00723 | PANTHER:PTHR11525 | PANTHER:PTHR11525:SF3 | InterPro:Polyprenyl_synt | InterPro:Polyprenyl_synt_CS | SUPFAM:SSF48576 |
| UniParc:UPI000B46D5F8 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:496971381..496993425
Molecular Weight (calculated)
40501.4 Da
IEP (calculated)
4.895
GRAVY (calculated)
-0.213
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAQGEAS TGTTTTTTMF RHVYETLKAE LLRDGSFDFN DDALRWIDAM LDYNVLGGKL NRGLAVVESY KLLKAGSEPN EEEHFLACIL GWGIEWLQAY
101: FLVLDDIMDN SQTRRGKPCW YRLPKVGLIA INDGLVLHSQ ISRIFKRYFY GKPYYVDLLD LFNEVEFRTT SGELLDQITT SEGHKDLSKY TVDVYGLIVE
201: YKTAYYSFYL AVGCALLPSG KNLDDYVQAK RILVEMGVYF QIQDDYLDSF GDPEVLGKIG TDIEDFKCSW LFVQALVRVD ERQKDILFEN YGKSDPACVA
301: KVKALYKELN LERVFSEYER ETYEKLISHI KAQPNEAVQA VLESFLHKIH MRK
101: FLVLDDIMDN SQTRRGKPCW YRLPKVGLIA INDGLVLHSQ ISRIFKRYFY GKPYYVDLLD LFNEVEFRTT SGELLDQITT SEGHKDLSKY TVDVYGLIVE
201: YKTAYYSFYL AVGCALLPSG KNLDDYVQAK RILVEMGVYF QIQDDYLDSF GDPEVLGKIG TDIEDFKCSW LFVQALVRVD ERQKDILFEN YGKSDPACVA
301: KVKALYKELN LERVFSEYER ETYEKLISHI KAQPNEAVQA VLESFLHKIH MRK
001: MADLKSTFLD VYSVLKSDLL QDPSFEFTHE SRQWLERMLD YNVRGGKLNR GLSVVDSYKL LKQGQDLTEK ETFLSCALGW CIEWLQAYFL VLDDIMDNSV
101: TRRGQPCWFR KPKVGMIAIN DGILLRNHIH RILKKHFREM PYYVDLVDLF NEVEFQTACG QMIDLITTFD GEKDLSKYSL QIHRRIVEYK TAYYSFYLPV
201: ACALLMAGEN LENHTDVKTV LVDMGIYFQV QDDYLDCFAD PETLGKIGTD IEDFKCSWLV VKALERCSEE QTKILYENYG KAEPSNVAKV KALYKELDLE
301: GAFMEYEKES YEKLTKLIEA HQSKAIQAVL KSFLAKIYKR QK
101: TRRGQPCWFR KPKVGMIAIN DGILLRNHIH RILKKHFREM PYYVDLVDLF NEVEFQTACG QMIDLITTFD GEKDLSKYSL QIHRRIVEYK TAYYSFYLPV
201: ACALLMAGEN LENHTDVKTV LVDMGIYFQV QDDYLDCFAD PETLGKIGTD IEDFKCSWLV VKALERCSEE QTKILYENYG KAEPSNVAKV KALYKELDLE
301: GAFMEYEKES YEKLTKLIEA HQSKAIQAVL KSFLAKIYKR QK
Arabidopsis Description
FPS2Farnesyl pyrophosphate synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q43315]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.