Factsheet for HORVU3Hr1G065960.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G286300.2	Wheat	cytosol	97.46	97.74
TraesCS3D01G255200.1	Wheat	cytosol	96.62	96.89
HORVU2Hr1G073510.1	Barley	cytosol	17.18	91.04
Os01t0703400-01	Rice	cytosol, mitochondrion	89.01	89.52
EES01337	Sorghum	cytosol	88.17	87.92
TraesCS3A01G254300.1	Wheat	cytosol	87.61	87.85
Zm00001d043727_P001	Maize	cytosol	87.61	87.61
Zm00001d011673_P001	Maize	cytosol	86.48	86.48
HORVU1Hr1G079070.1	Barley	cytosol	75.77	81.76
HORVU6Hr1G033960.1	Barley	endoplasmic reticulum	42.25	81.52
HORVU7Hr1G080750.1	Barley	endoplasmic reticulum, plasma membrane	41.69	80.43
HORVU3Hr1G065190.1	Barley	cytosol	64.23	64.59
HORVU2Hr1G111540.10	Barley	cytosol, plasma membrane	54.93	56.2
HORVU1Hr1G043190.1	Barley	extracellular	18.03	56.14

Protein Annotations

Gene3D:1.10.600.10	MapMan:9.1.3.2	EMBL:AK353559	UniProt:F2CPK7	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008299	GO:GO:0009058	GO:GO:0009987
GO:GO:0016740	EnsemblPlantsGene:HORVU3Hr1G065960	EnsemblPlants:HORVU3Hr1G065960.4	InterPro:IPR008949	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF00348
ScanProsite:PS00444	ScanProsite:PS00723	PANTHER:PTHR11525	PANTHER:PTHR11525:SF11	InterPro:Polyprenyl_synt	InterPro:Polyprenyl_synt_CS
SUPFAM:SSF48576	UniParc:UPI0002004411	SEG:seg	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CPK7]

Coordinates

chrchr3H:+:502806392..502811563

Molecular Weight (calculated)

40672.5 Da

IEP (calculated)

4.720

GRAVY (calculated)

-0.285

Length

355 amino acids

Sequence
(BLAST)

001: MAAAAAVALS NGSGGDSKAE FAEIYSRLKE EMLEDPAFEF TDESLQWIDR MLDYNVLGGK CNRGLSVIDS YKTLKGVDVL SKEETFLACT LGWCIEWLQA
101: YFLVLDDIMD NSQTRRGQPC WFRVPQVGLI AVNDGIILRN HISRILQRHF RGKPYYVDLI DLFNEVEFKT ASGQLLDLIT THEGEKDLTK YNLNVHRRIV
201: QYKTAYYSFY LPVACALLLS GENLDNFGDV KNILVEMGTY FQVQDDYLDC FGDPESIGKI GTDIEDYKCS WLVVQALDHA DESQKRILLE NYGKSDPESV
301: AKVKDLYKEL DLETAFHKFE RESYNKLITD IEAQPSKAVQ KVLMSFLEKI YKRQK

Best Arabidopsis Sequence Match ( AT5G47770.1 )
(BLAST)

001: MSVSCCCRNL GKTIKKAIPS HHLHLRSLGG SLYRRRIQSS SMETDLKSTF LNVYSVLKSD LLHDPSFEFT NESRLWVDRM LDYNVRGGKL NRGLSVVDSF
101: KLLKQGNDLT EQEVFLSCAL GWCIEWLQAY FLVLDDIMDN SVTRRGQPCW FRVPQVGMVA INDGILLRNH IHRILKKHFR DKPYYVDLVD LFNEVELQTA
201: CGQMIDLITT FEGEKDLAKY SLSIHRRIVQ YKTAYYSFYL PVACALLMAG ENLENHIDVK NVLVDMGIYF QVQDDYLDCF ADPETLGKIG TDIEDFKCSW
301: LVVKALERCS EEQTKILYEN YGKPDPSNVA KVKDLYKELD LEGVFMEYES KSYEKLTGAI EGHQSKAIQA VLKSFLAKIY KRQK

Arabidopsis Description

FPS1Farnesyl pyrophosphate synthase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09152]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.