Factsheet for HORVU1Hr1G043190.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
TargetP:	secretory
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G073510.1	Barley	cytosol	49.12	83.58
HORVU7Hr1G080750.1	Barley	endoplasmic reticulum, plasma membrane	55.26	34.24
HORVU6Hr1G033960.1	Barley	endoplasmic reticulum	54.39	33.7
Solyc10g005810.2.1	Tomato	cytosol, mitochondrion	42.98	18.22
HORVU3Hr1G065960.4	Barley	cytosol	56.14	18.03
HORVU1Hr1G079070.1	Barley	cytosol	49.12	17.02
VIT_19s0015g01010.t01	Wine grape	cytosol	45.61	15.25
CDY28904	Canola	cytosol	44.74	14.91
AT4G17190.1	Thale cress	cytosol	44.74	14.91
Bra022156.1-P	Field mustard	cytosol	44.74	14.91
CDY17706	Canola	cytosol	44.74	14.87
KRH36635	Soybean	cytosol, nucleus	43.86	14.62
CDX77796	Canola	cytosol	43.86	14.58
KRH11625	Soybean	cytosol, nucleus	42.98	14.33
PGSC0003DMT400022420	Potato	cytosol	42.98	14.33
Bra024917.1-P	Field mustard	mitochondrion	46.49	14.25
HORVU3Hr1G065190.1	Barley	cytosol	43.86	14.16
Solyc12g015860.1.1	Tomato	cytosol, plastid	42.11	14.04
PGSC0003DMT400076602	Potato	cytosol	42.11	14.04
CDY68039	Canola	cytosol, mitochondrion, plastid	45.61	13.47
AT5G47770.1	Thale cress	cytosol, mitochondrion	44.74	13.28
PGSC0003DMT400037236	Potato	cytosol	34.21	12.75
HORVU2Hr1G111540.10	Barley	cytosol, plasma membrane	38.6	12.68
KRH30637	Soybean	cytosol	2.63	3.41
KRG89761	Soybean	cytosol	6.14	3.12
Solyc10g005840.2.1	Tomato	cytosol, mitochondrion	2.63	1.21
Os04t0657300-00	Rice	cytosol, nucleus	0.0	0.0
KRH63452	Soybean	cytosol	0.0	0.0
Solyc10g005820.1.1	Tomato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU1Hr1G043190.1	EnsemblPlantsGene:HORVU1Hr1G043190	Gene3D:1.10.600.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0008299	GO:GO:0009058	GO:GO:0009987	InterPro:IPR008949	InterPro:Isoprenoid_synthase_dom_sf	InterPro:Polyprenyl_synt
PANTHER:PTHR11525	PANTHER:PTHR11525:SF11	PFAM:PF00348	SUPFAM:SSF48576	UniParc:UPI000B485294	UniProt:A0A287FBD1
MapMan:50.2.5	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:313901323..313902848

Molecular Weight (calculated)

13098.2 Da

IEP (calculated)

6.475

GRAVY (calculated)

0.374

Length

114 amino acids

Sequence
(BLAST)

001: LSRLLLCFLN GGSFGWLLLV HGYFYSDSPL YSHVCLPMFM PCGLREIYMK KKMLDYNVLG GKCNRGLFVI DSYKTLKGVD VLSKEETFLA CTLGWCIEWL
101: QAYFLVLDDI MDNS

Best Arabidopsis Sequence Match ( AT4G17190.1 )
(BLAST)

001: MADLKSTFLD VYSVLKSDLL QDPSFEFTHE SRQWLERMLD YNVRGGKLNR GLSVVDSYKL LKQGQDLTEK ETFLSCALGW CIEWLQAYFL VLDDIMDNSV
101: TRRGQPCWFR KPKVGMIAIN DGILLRNHIH RILKKHFREM PYYVDLVDLF NEVEFQTACG QMIDLITTFD GEKDLSKYSL QIHRRIVEYK TAYYSFYLPV
201: ACALLMAGEN LENHTDVKTV LVDMGIYFQV QDDYLDCFAD PETLGKIGTD IEDFKCSWLV VKALERCSEE QTKILYENYG KAEPSNVAKV KALYKELDLE
301: GAFMEYEKES YEKLTKLIEA HQSKAIQAVL KSFLAKIYKR QK

Arabidopsis Description

FPS2Farnesyl pyrophosphate synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q43315]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.