Factsheet for HORVU1Hr1G079070.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G365800.1	Wheat	cytosol	96.35	90.57
TraesCS1B01G383400.1	Wheat	golgi	93.92	88.29
TraesCS1D01G371200.2	Wheat	cytosol	95.14	87.92
EES19888	Sorghum	cytosol	88.15	82.15
HORVU2Hr1G073510.1	Barley	cytosol	15.81	77.61
Os05t0543400-01	Rice	cytosol	83.28	77.18
HORVU3Hr1G065960.4	Barley	cytosol	81.76	75.77
Zm00001d009431_P001	Maize	cytosol	88.15	72.5
HORVU7Hr1G080750.1	Barley	endoplasmic reticulum, plasma membrane	38.91	69.57
HORVU6Hr1G033960.1	Barley	endoplasmic reticulum	38.6	69.02
HORVU3Hr1G065190.1	Barley	cytosol	65.05	60.62
HORVU2Hr1G111540.10	Barley	cytosol, plasma membrane	56.53	53.6
HORVU1Hr1G043190.1	Barley	extracellular	17.02	49.12

Protein Annotations

Gene3D:1.10.600.10	MapMan:9.1.3.2	UniProt:A0A287GE40	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0008299	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
EnsemblPlantsGene:HORVU1Hr1G079070	EnsemblPlants:HORVU1Hr1G079070.1	InterPro:IPR008949	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF00348	ScanProsite:PS00444
ScanProsite:PS00723	PANTHER:PTHR11525	PANTHER:PTHR11525:SF11	InterPro:Polyprenyl_synt	InterPro:Polyprenyl_synt_CS	SUPFAM:SSF48576
UniParc:UPI000B46D70E	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:522355835..522360081

Molecular Weight (calculated)

37581.7 Da

IEP (calculated)

4.587

GRAVY (calculated)

-0.227

Length

329 amino acids

Sequence
(BLAST)

001: MAAAAAANGG GGDTKAAFAR IYDALKEELL RDPAFDYTES SHQWIDRMLD YNVLGGKCNR GLSVVDSYKL LKGVDALTEE EMFLASTLGW CIEWLQAFFL
101: VLDDIMDDSH TRRGQPCWFR VPQVGFIAVN DGILLRNHIS RMLRLHFKKK PYYADLLDLF NEVEFKTASG QMLDLITTHE GEKDLTKYNI GVHRRIVQFK
201: TAYYSFYLPV ACALLLSGEN LENYGAVENI LVEMGTYFQV QDDYLDCYGD PEFIGKIGTD IEDYKCSWLV VQALERADES QKSILFENYG KKDPACVAKV
301: KDLYKELNLE GLFHEYESES YKKLITDIE

Best Arabidopsis Sequence Match ( AT5G47770.1 )
(BLAST)

001: MSVSCCCRNL GKTIKKAIPS HHLHLRSLGG SLYRRRIQSS SMETDLKSTF LNVYSVLKSD LLHDPSFEFT NESRLWVDRM LDYNVRGGKL NRGLSVVDSF
101: KLLKQGNDLT EQEVFLSCAL GWCIEWLQAY FLVLDDIMDN SVTRRGQPCW FRVPQVGMVA INDGILLRNH IHRILKKHFR DKPYYVDLVD LFNEVELQTA
201: CGQMIDLITT FEGEKDLAKY SLSIHRRIVQ YKTAYYSFYL PVACALLMAG ENLENHIDVK NVLVDMGIYF QVQDDYLDCF ADPETLGKIG TDIEDFKCSW
301: LVVKALERCS EEQTKILYEN YGKPDPSNVA KVKDLYKELD LEGVFMEYES KSYEKLTGAI EGHQSKAIQA VLKSFLAKIY KRQK

Arabidopsis Description

FPS1Farnesyl pyrophosphate synthase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09152]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.