Factsheet for HORVU7Hr1G080750.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
TargetP:	secretory
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G033960.1	Barley	endoplasmic reticulum	94.02	94.02
HORVU2Hr1G073510.1	Barley	cytosol	31.52	86.57
HORVU1Hr1G043190.1	Barley	extracellular	34.24	55.26
HORVU3Hr1G065960.4	Barley	cytosol	80.43	41.69
TraesCS3A01G254300.1	Wheat	cytosol	79.89	41.53
TraesCS3B01G286300.2	Wheat	cytosol	79.89	41.53
TraesCS3D01G255200.1	Wheat	cytosol	79.89	41.53
EES01337	Sorghum	cytosol	79.35	41.01
Zm00001d043727_P001	Maize	cytosol	78.8	40.85
Zm00001d011673_P001	Maize	cytosol	77.72	40.28
Os01t0703400-01	Rice	cytosol, mitochondrion	77.17	40.23
HORVU1Hr1G079070.1	Barley	cytosol	69.57	38.91
HORVU3Hr1G065190.1	Barley	cytosol	58.15	30.31
HORVU2Hr1G111540.10	Barley	cytosol, plasma membrane	47.28	25.07

Protein Annotations

EnsemblPlants:HORVU7Hr1G080750.1	EnsemblPlantsGene:HORVU7Hr1G080750	Gene3D:1.10.600.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0008299	GO:GO:0009058	GO:GO:0009987	InterPro:IPR008949	InterPro:Isoprenoid_synthase_dom_sf	InterPro:Polyprenyl_synt
InterPro:Polyprenyl_synt_CS	PANTHER:PTHR11525	PANTHER:PTHR11525:SF11	PFAM:PF00348	ScanProsite:PS00723	SignalP:SignalP-noTM
SUPFAM:SSF48576	UniParc:UPI000B47E452	UniProt:A0A287X1Z9	MapMan:9.1.3.2	:	:

Description

No Description!

Coordinates

chrchr7H:-:479496478..479498009

Molecular Weight (calculated)

21354.3 Da

IEP (calculated)

8.051

GRAVY (calculated)

0.122

Length

184 amino acids

Sequence
(BLAST)

001: LMIKPVTIML FKWRIVRLAV VSMLDYNVLG GKCNRGLFVI DSYKTLKGVD VLSKEETFLA CTLGWCIEWL QAYFLVLDDI MDNSQTRRGE PCWFMVPQVG
101: LIAVNDGIIL RNHISRILQR HFKGKPYYVD LIDLFNEVEF KTTSGQLLDL ITTHEGEKDL TKYNLNVHRR AFQCITCLHL YSCN

Best Arabidopsis Sequence Match ( AT4G17190.1 )
(BLAST)

001: MADLKSTFLD VYSVLKSDLL QDPSFEFTHE SRQWLERMLD YNVRGGKLNR GLSVVDSYKL LKQGQDLTEK ETFLSCALGW CIEWLQAYFL VLDDIMDNSV
101: TRRGQPCWFR KPKVGMIAIN DGILLRNHIH RILKKHFREM PYYVDLVDLF NEVEFQTACG QMIDLITTFD GEKDLSKYSL QIHRRIVEYK TAYYSFYLPV
201: ACALLMAGEN LENHTDVKTV LVDMGIYFQV QDDYLDCFAD PETLGKIGTD IEDFKCSWLV VKALERCSEE QTKILYENYG KAEPSNVAKV KALYKELDLE
301: GAFMEYEKES YEKLTKLIEA HQSKAIQAVL KSFLAKIYKR QK

Arabidopsis Description

FPS2Farnesyl pyrophosphate synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q43315]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.