Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G043190.1 | Barley | extracellular | 83.58 | 49.12 |
| HORVU6Hr1G033960.1 | Barley | endoplasmic reticulum | 88.06 | 32.07 |
| HORVU7Hr1G080750.1 | Barley | endoplasmic reticulum, plasma membrane | 86.57 | 31.52 |
| HORVU3Hr1G065960.4 | Barley | cytosol | 91.04 | 17.18 |
| TraesCS3B01G286300.2 | Wheat | cytosol | 89.55 | 16.95 |
| TraesCS3D01G255200.1 | Wheat | cytosol | 89.55 | 16.95 |
| EES01337 | Sorghum | cytosol | 89.55 | 16.85 |
| Zm00001d011673_P001 | Maize | cytosol | 88.06 | 16.62 |
| Zm00001d043727_P001 | Maize | cytosol | 88.06 | 16.62 |
| TraesCS3A01G254300.1 | Wheat | cytosol | 86.57 | 16.38 |
| Os01t0703400-01 | Rice | cytosol, mitochondrion | 83.58 | 15.86 |
| HORVU1Hr1G079070.1 | Barley | cytosol | 77.61 | 15.81 |
| HORVU3Hr1G065190.1 | Barley | cytosol | 68.66 | 13.03 |
| HORVU2Hr1G111540.10 | Barley | cytosol, plasma membrane | 58.21 | 11.24 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G073510.1 | EnsemblPlantsGene:HORVU2Hr1G073510 | Gene3D:1.10.600.10 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008299 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR008949 | InterPro:Isoprenoid_synthase_dom_sf | InterPro:Polyprenyl_synt |
| PANTHER:PTHR11525 | PANTHER:PTHR11525:SF11 | PFAM:PF00348 | SUPFAM:SSF48576 | UniParc:UPI000B485BA8 | UniProt:A0A287IFV8 |
| MapMan:50.2.5 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:530612783..530614321
Molecular Weight (calculated)
7582.2 Da
IEP (calculated)
7.248
GRAVY (calculated)
-0.036
Length
67 amino acids
Sequence
(BLAST)
(BLAST)
1: IKPKPDYNVL GGKCNRGLSV IGSYKTLKGV DVLSKEETFL AYTLGWCIEW LQAYFLVLDH IMDNSQT
001: MADLKSTFLD VYSVLKSDLL QDPSFEFTHE SRQWLERMLD YNVRGGKLNR GLSVVDSYKL LKQGQDLTEK ETFLSCALGW CIEWLQAYFL VLDDIMDNSV
101: TRRGQPCWFR KPKVGMIAIN DGILLRNHIH RILKKHFREM PYYVDLVDLF NEVEFQTACG QMIDLITTFD GEKDLSKYSL QIHRRIVEYK TAYYSFYLPV
201: ACALLMAGEN LENHTDVKTV LVDMGIYFQV QDDYLDCFAD PETLGKIGTD IEDFKCSWLV VKALERCSEE QTKILYENYG KAEPSNVAKV KALYKELDLE
301: GAFMEYEKES YEKLTKLIEA HQSKAIQAVL KSFLAKIYKR QK
101: TRRGQPCWFR KPKVGMIAIN DGILLRNHIH RILKKHFREM PYYVDLVDLF NEVEFQTACG QMIDLITTFD GEKDLSKYSL QIHRRIVEYK TAYYSFYLPV
201: ACALLMAGEN LENHTDVKTV LVDMGIYFQV QDDYLDCFAD PETLGKIGTD IEDFKCSWLV VKALERCSEE QTKILYENYG KAEPSNVAKV KALYKELDLE
301: GAFMEYEKES YEKLTKLIEA HQSKAIQAVL KSFLAKIYKR QK
Arabidopsis Description
FPS2Farnesyl pyrophosphate synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q43315]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.