Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES01337 | Sorghum | cytosol | 92.11 | 91.85 |
| Zm00001d043727_P001 | Maize | cytosol | 90.99 | 90.99 |
| HORVU2Hr1G073510.1 | Barley | cytosol | 16.62 | 88.06 |
| Os01t0703400-01 | Rice | cytosol, mitochondrion | 86.48 | 86.97 |
| TraesCS3B01G286300.2 | Wheat | cytosol | 86.48 | 86.72 |
| HORVU3Hr1G065960.4 | Barley | cytosol | 86.48 | 86.48 |
| TraesCS3D01G255200.1 | Wheat | cytosol | 85.63 | 85.88 |
| TraesCS3A01G254300.1 | Wheat | cytosol | 80.56 | 80.79 |
| HORVU7Hr1G080750.1 | Barley | endoplasmic reticulum, plasma membrane | 40.28 | 77.72 |
| HORVU6Hr1G033960.1 | Barley | endoplasmic reticulum | 40.0 | 77.17 |
| KRH11625 | Soybean | cytosol, nucleus | 71.27 | 73.98 |
| VIT_19s0015g01010.t01 | Wine grape | cytosol | 70.7 | 73.61 |
| Solyc10g005820.1.1 | Tomato | cytosol | 24.51 | 73.11 |
| KRH36635 | Soybean | cytosol, nucleus | 70.42 | 73.1 |
| Zm00001d009431_P001 | Maize | cytosol | 82.25 | 73.0 |
| CDY17706 | Canola | cytosol | 69.58 | 72.01 |
| CDX77796 | Canola | cytosol | 69.3 | 71.72 |
| Bra022156.1-P | Field mustard | cytosol | 68.17 | 70.76 |
| PGSC0003DMT400022420 | Potato | cytosol | 68.17 | 70.76 |
| CDY28904 | Canola | cytosol | 68.17 | 70.76 |
| AT4G17190.1 | Thale cress | cytosol | 67.89 | 70.47 |
| PGSC0003DMT400076602 | Potato | cytosol | 66.48 | 69.01 |
| Solyc12g015860.1.1 | Tomato | cytosol, plastid | 65.63 | 68.13 |
| KRH63452 | Soybean | cytosol | 23.38 | 68.03 |
| PGSC0003DMT400037236 | Potato | cytosol | 58.03 | 67.32 |
| Solyc10g005840.2.1 | Tomato | cytosol, mitochondrion | 46.2 | 66.13 |
| Bra024917.1-P | Field mustard | mitochondrion | 67.61 | 64.52 |
| AT5G47770.1 | Thale cress | cytosol, mitochondrion | 68.45 | 63.28 |
| CDY68039 | Canola | cytosol, mitochondrion, plastid | 68.73 | 63.21 |
| KRH30637 | Soybean | cytosol | 14.65 | 59.09 |
| KRG89761 | Soybean | cytosol | 33.8 | 53.57 |
| Solyc10g005810.2.1 | Tomato | cytosol, mitochondrion | 40.0 | 52.79 |
Protein Annotations
| Gene3D:1.10.600.10 | MapMan:9.1.3.2 | ProteinID:AQK97712.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008299 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 |
| InterPro:IPR008949 | InterPro:Isoprenoid_synthase_dom_sf | UniProt:K7V8H3 | PFAM:PF00348 | ScanProsite:PS00444 | ScanProsite:PS00723 |
| PANTHER:PTHR11525 | PANTHER:PTHR11525:SF11 | InterPro:Polyprenyl_synt | InterPro:Polyprenyl_synt_CS | SUPFAM:SSF48576 | UniParc:UPI000221BD53 |
| EnsemblPlantsGene:Zm00001d011673 | EnsemblPlants:Zm00001d011673_P001 | EnsemblPlants:Zm00001d011673_T001 | : | : | : |
Description
farnesyl diphosphate synthase2 farnesyl diphosphate synthase2
Coordinates
chr8:+:158269867..158274000
Molecular Weight (calculated)
40794.9 Da
IEP (calculated)
4.834
GRAVY (calculated)
-0.225
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MATVEVVVAN GLGGADTKTV FKETYSKLKE EMLDDPAFEF TDESLQWIDR MLDYNVLGGK CNRGLSVIDS YRILKGVDVL SKEETFLACT LGWCIEWLQA
101: YFLVLDDIMD NSQTRRGQPC WFRVPQVGLI AVNDGIILRN HISRILQRHF KGKPYYVDVI DLFNEVEFKT ASGQMLDLIT THEGEKDLTK YNLTVRRHIV
201: QYKTAYYSFY LPVACALLLA GENLDNFGDV KNILVEMGTY FQVQDDYLDC FGDPEFIGKI GTDIEDYKCS WLVVQALEHA DEKQKNILFE SYGKSDPACV
301: AKVKDLYKEL KLEEVFQAYE RESYNKLIAD IEAQPSKAVQ SVLKSFLHKI YKRDK
101: YFLVLDDIMD NSQTRRGQPC WFRVPQVGLI AVNDGIILRN HISRILQRHF KGKPYYVDVI DLFNEVEFKT ASGQMLDLIT THEGEKDLTK YNLTVRRHIV
201: QYKTAYYSFY LPVACALLLA GENLDNFGDV KNILVEMGTY FQVQDDYLDC FGDPEFIGKI GTDIEDYKCS WLVVQALEHA DEKQKNILFE SYGKSDPACV
301: AKVKDLYKEL KLEEVFQAYE RESYNKLIAD IEAQPSKAVQ SVLKSFLHKI YKRDK
001: MSVSCCCRNL GKTIKKAIPS HHLHLRSLGG SLYRRRIQSS SMETDLKSTF LNVYSVLKSD LLHDPSFEFT NESRLWVDRM LDYNVRGGKL NRGLSVVDSF
101: KLLKQGNDLT EQEVFLSCAL GWCIEWLQAY FLVLDDIMDN SVTRRGQPCW FRVPQVGMVA INDGILLRNH IHRILKKHFR DKPYYVDLVD LFNEVELQTA
201: CGQMIDLITT FEGEKDLAKY SLSIHRRIVQ YKTAYYSFYL PVACALLMAG ENLENHIDVK NVLVDMGIYF QVQDDYLDCF ADPETLGKIG TDIEDFKCSW
301: LVVKALERCS EEQTKILYEN YGKPDPSNVA KVKDLYKELD LEGVFMEYES KSYEKLTGAI EGHQSKAIQA VLKSFLAKIY KRQK
101: KLLKQGNDLT EQEVFLSCAL GWCIEWLQAY FLVLDDIMDN SVTRRGQPCW FRVPQVGMVA INDGILLRNH IHRILKKHFR DKPYYVDLVD LFNEVELQTA
201: CGQMIDLITT FEGEKDLAKY SLSIHRRIVQ YKTAYYSFYL PVACALLMAG ENLENHIDVK NVLVDMGIYF QVQDDYLDCF ADPETLGKIG TDIEDFKCSW
301: LVVKALERCS EEQTKILYEN YGKPDPSNVA KVKDLYKELD LEGVFMEYES KSYEKLTGAI EGHQSKAIQA VLKSFLAKIY KRQK
Arabidopsis Description
FPS1Farnesyl pyrophosphate synthase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09152]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.