CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63452	Soybean	cytosol	54.55	39.34
KRG89761	Soybean	cytosol	76.14	29.91
KRH36635	Soybean	cytosol, nucleus	82.95	21.34
KRH11625	Soybean	cytosol, nucleus	79.55	20.47
AT4G17190.1	Thale cress	cytosol	65.91	16.96
Bra022156.1-P	Field mustard	cytosol	62.5	16.08
CDY28904	Canola	cytosol	62.5	16.08
CDX77796	Canola	cytosol	62.5	16.04
CDY17706	Canola	cytosol	62.5	16.04
TraesCS3D01G258500.1	Wheat	cytosol	61.36	15.34
GSMUA_Achr3P28530_001	Banana	cytosol	60.23	15.27
TraesCS3D01G255200.1	Wheat	cytosol	61.36	15.25
TraesCS3B01G286300.2	Wheat	cytosol	61.36	15.25
TraesCS3A01G254300.1	Wheat	cytosol	61.36	15.25
TraesCS3A01G258600.1	Wheat	cytosol	60.23	15.01
Zm00001d043727_P001	Maize	cytosol	60.23	14.93
EES01337	Sorghum	cytosol	60.23	14.89
AT5G47770.1	Thale cress	cytosol, mitochondrion	64.77	14.84
EES19888	Sorghum	cytosol	59.09	14.73
Zm00001d011673_P001	Maize	cytosol	59.09	14.65
TraesCS1A01G365800.1	Wheat	cytosol	57.95	14.57
GSMUA_Achr9P22220_001	Banana	cytosol	59.09	14.57
CDY68039	Canola	cytosol, mitochondrion, plastid	62.5	14.25
TraesCS1D01G371200.2	Wheat	cytosol	56.82	14.04
TraesCS1B01G383400.1	Wheat	golgi	55.68	14.0
Bra024917.1-P	Field mustard	mitochondrion	56.82	13.44
TraesCS2D01G502400.1	Wheat	cytosol	60.23	12.93
TraesCS2B01G530100.1	Wheat	cytosol	60.23	12.93
TraesCS2A01G501900.1	Wheat	cytosol	60.23	12.93
Zm00001d009431_P001	Maize	cytosol	57.95	12.75
KXG27307	Sorghum	cytosol	52.27	11.36
HORVU1Hr1G043190.1	Barley	extracellular	3.41	2.63
Os04t0657300-00	Rice	cytosol, nucleus	0.0	0.0

Protein Annotations

Gene3D:1.10.600.10	MapMan:50.2.5	EMBL:ACUP02007050	EnsemblPlantsGene:GLYMA_11G197200	GO:GO:0003674	GO:GO:0003824
GO:GO:0004161	GO:GO:0004337	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008299	GO:GO:0009058	GO:GO:0009987
GO:GO:0016740	GO:GO:0045337	InterPro:IPR008949	InterPro:Isoprenoid_synthase_dom_sf	UniProt:K7LR50	EnsemblPlants:KRH30637
ProteinID:KRH30637	ProteinID:KRH30637.1	PFAM:PF00348	PANTHER:PTHR11525	InterPro:Polyprenyl_synt	SUPFAM:SSF48576
UniParc:UPI00029485E6	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:27231160..27231588

Molecular Weight (calculated)

9942.9 Da

IEP (calculated)

4.788

GRAVY (calculated)

-0.502

Length

88 amino acids

Sequence
(BLAST)

1: MDIADKPDLS RCSLKYKAFG YLDCFGDPQT IGKIGTDIED FKCSWLIAKA LELSNEQQKK VVQENYGKPD PENVAKVKAL YNELNLQV

Best Arabidopsis Sequence Match ( AT4G01883.1 )
(BLAST)

001: MSATAILSVN NPKDLVTGFG NRTFHSRSNF AKPSSRLFPS SSSPMKPLTL ASRFSPLIST NRSFKSSVFR RFDTLMEWQE CKVKMKVEVP VSVAYGLYSE
101: RESIPKWMTF ISSVKVLKDK PDLSRWTLKY KAFGQNLEYA WLAKNLQPLP NQKIHWISLE GLPNKGTVRF FPLGPSSCDV ELTFAYEVPL LLIPFAAALQ
201: PLMQGLIKNS LEQFAEIAKS TKTT

Arabidopsis Description

Polyketide cyclase / dehydrase and lipid transport protein [Source:UniProtKB/TrEMBL;Acc:Q1G3L2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.