Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 3
- plastid 2
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2B01G530100.1 | Wheat | cytosol | 99.02 | 99.02 |
TraesCS2A01G501900.1 | Wheat | cytosol | 99.02 | 99.02 |
HORVU2Hr1G111540.10 | Barley | cytosol, plasma membrane | 83.17 | 98.27 |
KRH63452 | Soybean | cytosol | 18.05 | 60.66 |
GSMUA_Achr3P28530_001 | Banana | cytosol | 51.22 | 60.52 |
KRH30637 | Soybean | cytosol | 12.93 | 60.23 |
GSMUA_Achr9P22220_001 | Banana | cytosol | 52.44 | 60.22 |
VIT_19s0015g01010.t01 | Wine grape | cytosol | 49.51 | 59.53 |
KRH36635 | Soybean | cytosol, nucleus | 49.51 | 59.36 |
KRH11625 | Soybean | cytosol, nucleus | 49.02 | 58.77 |
CDY28904 | Canola | cytosol | 48.29 | 57.89 |
Bra022156.1-P | Field mustard | cytosol | 48.29 | 57.89 |
CDY17706 | Canola | cytosol | 48.29 | 57.73 |
CDX77796 | Canola | cytosol | 48.29 | 57.73 |
PGSC0003DMT400022420 | Potato | cytosol | 48.05 | 57.6 |
Solyc10g005820.1.1 | Tomato | cytosol | 16.59 | 57.14 |
TraesCS3D01G258500.1 | Wheat | cytosol | 48.78 | 56.82 |
AT4G17190.1 | Thale cress | cytosol | 47.32 | 56.73 |
PGSC0003DMT400076602 | Potato | cytosol | 47.32 | 56.73 |
TraesCS1D01G371200.2 | Wheat | cytosol | 49.02 | 56.46 |
Solyc12g015860.1.1 | Tomato | cytosol, plastid | 46.59 | 55.85 |
TraesCS3D01G255200.1 | Wheat | cytosol | 47.56 | 55.08 |
PGSC0003DMT400037236 | Potato | cytosol | 40.24 | 53.92 |
Solyc10g005840.2.1 | Tomato | cytosol, mitochondrion | 31.95 | 52.82 |
AT5G47770.1 | Thale cress | cytosol, mitochondrion | 48.78 | 52.08 |
Bra024917.1-P | Field mustard | mitochondrion | 47.07 | 51.88 |
CDY68039 | Canola | cytosol, mitochondrion, plastid | 48.29 | 51.3 |
KRG89761 | Soybean | cytosol | 26.83 | 49.11 |
Solyc10g005810.2.1 | Tomato | cytosol, mitochondrion | 28.78 | 43.87 |
Protein Annotations
EnsemblPlants:TraesCS2D01G502400.1 | EnsemblPlantsGene:TraesCS2D01G502400 | Gene3D:1.10.600.10 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0008299 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR008949 | InterPro:Isoprenoid_synthase_dom_sf | InterPro:Polyprenyl_synt |
InterPro:Polyprenyl_synt_CS | PANTHER:PTHR11525 | PANTHER:PTHR11525:SF2 | PFAM:PF00348 | ScanProsite:PS00444 | SEG:seg |
SUPFAM:SSF48576 | TIGR:cd00685 | MapMan:9.1.3.2 | : | : | : |
Description
No Description!
Coordinates
chr2D:+:596203523..596209304
Molecular Weight (calculated)
46802.6 Da
IEP (calculated)
5.254
GRAVY (calculated)
-0.176
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MGALAASIAS HVPSGMLSAG LAALAALPNP GELVRKAARL EDELRELLRL NGRGAGAGAE QGAGNGAQQT RERFLRAYER LKDELLNDRA FNFDFTEETR
101: QWVAKMLDYN VPGGKLNRGL SVIDSYMLLR EGTEVDEEDF YLACVLGWCI EWLQASALVM DDITDNAYTR RDNLCWYKLP TVGLSAINDG VLLKCHVQAI
201: IKRYFKEKFY FMELMELWNE IGLQTAMGQM LDLITTHTGA KDLARYRIQG YRRIVKYKTS YYSFYLPVAC ALLLNGAKLS DYVELKNVLI EMGVYFQIQD
301: DYLDCFGDPQ VIGKVGTDIE DYKCSWLIVQ AMELANENEM KILYENYGKS CPECVAAVKN VYKELDLQDI FLEYESRVYK HLVSTIDAEP DRAIREILKI
401: FLKKIYRRKK
101: QWVAKMLDYN VPGGKLNRGL SVIDSYMLLR EGTEVDEEDF YLACVLGWCI EWLQASALVM DDITDNAYTR RDNLCWYKLP TVGLSAINDG VLLKCHVQAI
201: IKRYFKEKFY FMELMELWNE IGLQTAMGQM LDLITTHTGA KDLARYRIQG YRRIVKYKTS YYSFYLPVAC ALLLNGAKLS DYVELKNVLI EMGVYFQIQD
301: DYLDCFGDPQ VIGKVGTDIE DYKCSWLIVQ AMELANENEM KILYENYGKS CPECVAAVKN VYKELDLQDI FLEYESRVYK HLVSTIDAEP DRAIREILKI
401: FLKKIYRRKK
001: MADLKSTFLD VYSVLKSDLL QDPSFEFTHE SRQWLERMLD YNVRGGKLNR GLSVVDSYKL LKQGQDLTEK ETFLSCALGW CIEWLQAYFL VLDDIMDNSV
101: TRRGQPCWFR KPKVGMIAIN DGILLRNHIH RILKKHFREM PYYVDLVDLF NEVEFQTACG QMIDLITTFD GEKDLSKYSL QIHRRIVEYK TAYYSFYLPV
201: ACALLMAGEN LENHTDVKTV LVDMGIYFQV QDDYLDCFAD PETLGKIGTD IEDFKCSWLV VKALERCSEE QTKILYENYG KAEPSNVAKV KALYKELDLE
301: GAFMEYEKES YEKLTKLIEA HQSKAIQAVL KSFLAKIYKR QK
101: TRRGQPCWFR KPKVGMIAIN DGILLRNHIH RILKKHFREM PYYVDLVDLF NEVEFQTACG QMIDLITTFD GEKDLSKYSL QIHRRIVEYK TAYYSFYLPV
201: ACALLMAGEN LENHTDVKTV LVDMGIYFQV QDDYLDCFAD PETLGKIGTD IEDFKCSWLV VKALERCSEE QTKILYENYG KAEPSNVAKV KALYKELDLE
301: GAFMEYEKES YEKLTKLIEA HQSKAIQAVL KSFLAKIYKR QK
Arabidopsis Description
FPS2Farnesyl pyrophosphate synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q43315]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.