Factsheet for TraesCS1A01G365800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G079070.1	Barley	cytosol	90.57	96.35
TraesCS1B01G383400.1	Wheat	golgi	96.29	96.29
TraesCS1D01G371200.2	Wheat	cytosol	97.43	95.79
EES19888	Sorghum	cytosol	88.57	87.82
Os05t0543400-01	Rice	cytosol	83.71	82.54
Zm00001d009431_P001	Maize	cytosol	88.57	77.5
TraesCS3A01G254300.1	Wheat	cytosol	76.0	75.14
VIT_19s0015g01010.t01	Wine grape	cytosol	70.29	72.14
KRH11625	Soybean	cytosol, nucleus	70.0	71.64
KRH36635	Soybean	cytosol, nucleus	69.71	71.34
Solyc10g005820.1.1	Tomato	cytosol	24.0	70.59
CDX77796	Canola	cytosol	68.86	70.26
CDY17706	Canola	cytosol	68.57	69.97
Bra022156.1-P	Field mustard	cytosol	68.29	69.88
CDY28904	Canola	cytosol	68.29	69.88
PGSC0003DMT400022420	Potato	cytosol	67.71	69.3
TraesCS3A01G258600.1	Wheat	cytosol	69.71	69.12
AT4G17190.1	Thale cress	cytosol	67.14	68.71
PGSC0003DMT400076602	Potato	cytosol	64.86	66.37
Solyc12g015860.1.1	Tomato	cytosol, plastid	64.57	66.08
KRH63452	Soybean	cytosol	22.86	65.57
PGSC0003DMT400037236	Potato	cytosol	56.86	65.03
Solyc10g005840.2.1	Tomato	cytosol, mitochondrion	45.71	64.52
AT5G47770.1	Thale cress	cytosol, mitochondrion	68.57	62.5
Bra024917.1-P	Field mustard	mitochondrion	66.29	62.37
CDY68039	Canola	cytosol, mitochondrion, plastid	68.0	61.66
KRH30637	Soybean	cytosol	14.57	57.95
Solyc10g005810.2.1	Tomato	cytosol, mitochondrion	40.57	52.79
KRG89761	Soybean	cytosol	33.14	51.79
TraesCS2A01G501900.1	Wheat	cytosol	56.86	48.54

Protein Annotations

EnsemblPlants:TraesCS1A01G365800.1	EnsemblPlantsGene:TraesCS1A01G365800	Gene3D:1.10.600.10	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0008299	GO:GO:0009058	GO:GO:0009987	InterPro:IPR008949	InterPro:Isoprenoid_synthase_dom_sf	InterPro:Polyprenyl_synt
InterPro:Polyprenyl_synt_CS	PANTHER:PTHR11525	PANTHER:PTHR11525:SF11	PFAM:PF00348	ScanProsite:PS00444	ScanProsite:PS00723
SUPFAM:SSF48576	TIGR:cd00685	MapMan:9.1.3.2	:	:	:

Description

No Description!

Coordinates

chr1A:-:544603320..544606494

Molecular Weight (calculated)

40070.0 Da

IEP (calculated)

5.060

GRAVY (calculated)

-0.201

Length

350 amino acids

Sequence
(BLAST)

001: MAAAANGGGG ETKAAFARIY DALKAELLRD PAFEYTESSH QWIDRMLDYN VLGGKCNRGL SVVDSYKLLK GVDVLTEEEM FLASTLGWCI EWLQAFFLVL
101: DDIMDDSHTR RGQPCWFRVP QVGFIAVNDG ILLRNHISRM LRLHFKKKPY YADLLDLFNE VEFKTASGQM LDLITTHEGE KDLTKYNIGV HRRIVQFKTA
201: YYSFYLPVAC ALLLSGESLE NYGAVENILV EMGTYFQVQD DYLDCYGDPE FIGKIGTDIE DYKCSWLVVQ ALEHADESQK SILFENYGKK DPACVAKVKD
301: LYKELNLEAV FHEYESESYK KLIADIEAQP SVPVQKVLKS FLHKIYMRQK

Best Arabidopsis Sequence Match ( AT5G47770.1 )
(BLAST)

001: MSVSCCCRNL GKTIKKAIPS HHLHLRSLGG SLYRRRIQSS SMETDLKSTF LNVYSVLKSD LLHDPSFEFT NESRLWVDRM LDYNVRGGKL NRGLSVVDSF
101: KLLKQGNDLT EQEVFLSCAL GWCIEWLQAY FLVLDDIMDN SVTRRGQPCW FRVPQVGMVA INDGILLRNH IHRILKKHFR DKPYYVDLVD LFNEVELQTA
201: CGQMIDLITT FEGEKDLAKY SLSIHRRIVQ YKTAYYSFYL PVACALLMAG ENLENHIDVK NVLVDMGIYF QVQDDYLDCF ADPETLGKIG TDIEDFKCSW
301: LVVKALERCS EEQTKILYEN YGKPDPSNVA KVKDLYKELD LEGVFMEYES KSYEKLTGAI EGHQSKAIQA VLKSFLAKIY KRQK

Arabidopsis Description

FPS1Farnesyl pyrophosphate synthase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09152]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.