Factsheet for Zm00001d009431_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19888	Sorghum	cytosol	83.75	94.9
TraesCS1A01G365800.1	Wheat	cytosol	77.5	88.57
TraesCS1B01G383400.1	Wheat	golgi	77.5	88.57
HORVU1Hr1G079070.1	Barley	cytosol	72.5	88.15
TraesCS1D01G371200.2	Wheat	cytosol	77.5	87.08
Zm00001d043727_P001	Maize	cytosol	73.5	82.82
Zm00001d011673_P001	Maize	cytosol	73.0	82.25
Os05t0543400-01	Rice	cytosol	72.75	81.97
VIT_19s0015g01010.t01	Wine grape	cytosol	63.0	73.9
KRH11625	Soybean	cytosol, nucleus	63.0	73.68
KRH36635	Soybean	cytosol, nucleus	62.25	72.81
CDY17706	Canola	cytosol	62.0	72.3
CDX77796	Canola	cytosol	62.0	72.3
CDY28904	Canola	cytosol	61.25	71.64
Bra022156.1-P	Field mustard	cytosol	61.25	71.64
Solyc10g005820.1.1	Tomato	cytosol	21.25	71.43
AT4G17190.1	Thale cress	cytosol	60.5	70.76
PGSC0003DMT400022420	Potato	cytosol	60.25	70.47
PGSC0003DMT400076602	Potato	cytosol	57.75	67.54
KRH63452	Soybean	cytosol	20.5	67.21
Solyc12g015860.1.1	Tomato	cytosol, plastid	57.25	66.96
Solyc10g005840.2.1	Tomato	cytosol, mitochondrion	41.0	66.13
PGSC0003DMT400037236	Potato	cytosol	50.25	65.69
Bra024917.1-P	Field mustard	mitochondrion	59.75	64.25
AT5G47770.1	Thale cress	cytosol, mitochondrion	61.0	63.54
CDY68039	Canola	cytosol, mitochondrion, plastid	61.0	63.21
KRH30637	Soybean	cytosol	12.75	57.95
Solyc10g005810.2.1	Tomato	cytosol, mitochondrion	35.75	53.16
KRG89761	Soybean	cytosol	29.75	53.12

Protein Annotations

EntrezGene:541903	MapMan:9.1.3.2	UniProt:A0A1D6FJF0	ProteinID:AQK91887.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0008299	GO:GO:0009058	GO:GO:0009987
GO:GO:0016740	InterPro:IPR008949	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF00348	ScanProsite:PS00444	ScanProsite:PS00723
PANTHER:PTHR11525	PANTHER:PTHR11525:SF11	InterPro:Polyprenyl_synt	InterPro:Polyprenyl_synt_CS	SUPFAM:SSF48576	UniParc:UPI00084485B3
EnsemblPlantsGene:Zm00001d009431	EnsemblPlants:Zm00001d009431_P001	EnsemblPlants:Zm00001d009431_T001	:	:	:

Description

farnesyl pyrophosphate synthase1 farnesyl pyrophosphate synthase1

Coordinates

chr8:-:64107616..64111583

Molecular Weight (calculated)

45139.1 Da

IEP (calculated)

5.091

GRAVY (calculated)

-0.145

Length

400 amino acids

Sequence
(BLAST)

001: MAAGGNGAGG DTRAAFARIY KTLKEELLTD PAFEFTEESR QWIDRVTIPL SLSLAVAVPS FLPFSVPVSW LDPCGVRRAV RGLPVPSVTV AQPGSMVDYN
101: VLGGKCNRGL SVVDSYKLLK GADALGEEET FLACTLGWCI EWLQAFFLVL DDIMDDSHTR RGQPCWFRVP QVGLIAANDG IILRNHISRI LRRHFKGKPY
201: YADLLDLFNE VEFKTASGQL LDLITTHEGE KDLTKYNITV HGRIVQYKTA YYSFYLPVAC ALLLSGENLD NYGDVENILV EMGTYFQVQD DYLDCYGDPE
301: FIGKIGTDIE DYKCSWLVVQ ALERADESQK RILFENYGKK DPACVAKVKN LYKELDLEAV FQEYENESYK KLIADIEAQP SIAVQKVLKS FLHKIYKRQK

Best Arabidopsis Sequence Match ( AT5G47770.1 )
(BLAST)

001: MSVSCCCRNL GKTIKKAIPS HHLHLRSLGG SLYRRRIQSS SMETDLKSTF LNVYSVLKSD LLHDPSFEFT NESRLWVDRM LDYNVRGGKL NRGLSVVDSF
101: KLLKQGNDLT EQEVFLSCAL GWCIEWLQAY FLVLDDIMDN SVTRRGQPCW FRVPQVGMVA INDGILLRNH IHRILKKHFR DKPYYVDLVD LFNEVELQTA
201: CGQMIDLITT FEGEKDLAKY SLSIHRRIVQ YKTAYYSFYL PVACALLMAG ENLENHIDVK NVLVDMGIYF QVQDDYLDCF ADPETLGKIG TDIEDFKCSW
301: LVVKALERCS EEQTKILYEN YGKPDPSNVA KVKDLYKELD LEGVFMEYES KSYEKLTGAI EGHQSKAIQA VLKSFLAKIY KRQK

Arabidopsis Description

FPS1Farnesyl pyrophosphate synthase 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09152]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.