Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g005820.1.1 | Tomato | cytosol | 55.0 | 9.24 |
| KRH63452 | Soybean | cytosol | 55.0 | 9.02 |
| KRG89761 | Soybean | cytosol | 55.0 | 4.91 |
| Solyc10g005840.2.1 | Tomato | cytosol, mitochondrion | 50.0 | 4.03 |
| PGSC0003DMT400037236 | Potato | cytosol | 60.0 | 3.92 |
| Os01t0695300-01 | Rice | cytosol | 60.0 | 3.91 |
| AT4G17190.1 | Thale cress | cytosol | 60.0 | 3.51 |
| Bra022156.1-P | Field mustard | cytosol | 60.0 | 3.51 |
| CDY28904 | Canola | cytosol | 60.0 | 3.51 |
| CDX77796 | Canola | cytosol | 60.0 | 3.5 |
| CDY17706 | Canola | cytosol | 60.0 | 3.5 |
| VIT_19s0015g01010.t01 | Wine grape | cytosol | 55.0 | 3.23 |
| Bra024917.1-P | Field mustard | mitochondrion | 60.0 | 3.23 |
| KRH36635 | Soybean | cytosol, nucleus | 55.0 | 3.22 |
| KRH11625 | Soybean | cytosol, nucleus | 55.0 | 3.22 |
| PGSC0003DMT400022420 | Potato | cytosol | 55.0 | 3.22 |
| AT5G47770.1 | Thale cress | cytosol, mitochondrion | 60.0 | 3.12 |
| Os01t0703400-01 | Rice | cytosol, mitochondrion | 55.0 | 3.12 |
| CDY68039 | Canola | cytosol, mitochondrion, plastid | 60.0 | 3.11 |
| Os05t0543400-01 | Rice | cytosol | 55.0 | 3.1 |
| PGSC0003DMT400076602 | Potato | cytosol | 50.0 | 2.92 |
| Solyc12g015860.1.1 | Tomato | cytosol, plastid | 50.0 | 2.92 |
| Os04t0657100-01 | Rice | cytosol | 20.0 | 1.02 |
| Solyc10g005810.2.1 | Tomato | cytosol, mitochondrion | 10.0 | 0.74 |
| KRH30637 | Soybean | cytosol | 0.0 | 0.0 |
| HORVU1Hr1G043190.1 | Barley | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os04t0657300-00 | EnsemblPlantsGene:Os04g0657300 | ProteinID:BAS91415.1 | UniParc:UPI000393C348 | UniProt:A0A0P0WG30 | MapMan:35.2 |
Description
Conserved hypothetical protein. (Os04t0657300-00)
Coordinates
chr4:-:33524754..33525163
Molecular Weight (calculated)
2548.3 Da
IEP (calculated)
11.716
GRAVY (calculated)
-1.045
Length
20 amino acids
Sequence
(BLAST)
(BLAST)
1: DRAIRDILKS FLKKIYRRKK
001: MDNSVTRRGQ PCWFRKPKVG MIAINDGILL RNHIHRILKK HFREMPYYVD LVDLFNEVEF QTACGQMIDL ITTFDGEKDL SKYSLQIHRR IVEYKTAYYS
101: FYLPVACALL MAGENLENHT DVKTVLVDMG IYFQVQDDYL DCFADPETLG KIGTDIEDFK CSWLVVKALE RCSEEQTKIL YENYGKAEPS NVAKVKALYK
201: ELDLEGAFME YEKESYEKLT KLIEAHQSKA IQAVLKSFLA KIYKRQK
101: FYLPVACALL MAGENLENHT DVKTVLVDMG IYFQVQDDYL DCFADPETLG KIGTDIEDFK CSWLVVKALE RCSEEQTKIL YENYGKAEPS NVAKVKALYK
201: ELDLEGAFME YEKESYEKLT KLIEAHQSKA IQAVLKSFLA KIYKRQK
Arabidopsis Description
FPS2Farnesyl pyrophosphate synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q43315]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.