Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0194000-01 | Rice | nucleus | 10.18 | 6.93 |
| Os12t0176700-00 | Rice | nucleus | 17.09 | 5.52 |
| Os03t0722100-01 | Rice | cytosol, nucleus | 10.55 | 5.42 |
| Os04t0480300-01 | Rice | cytosol | 10.91 | 5.36 |
| Os11t0183700-01 | Rice | mitochondrion | 14.91 | 5.23 |
| Os04t0110300-02 | Rice | plasma membrane | 14.18 | 4.4 |
Protein Annotations
| MapMan:35.2 | EMBL:AK068996 | UniProt:B7EFQ5 | ProteinID:BAS89731.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| EnsemblPlantsGene:Os04g0480400 | EnsemblPlants:Os04t0480400-01 | PFAM:PF05477 | PANTHER:PTHR32175 | PANTHER:PTHR32175:SF2 | InterPro:Surf2 |
| UniParc:UPI000188AD58 | SEG:seg | : | : | : | : |
Description
Similar to OSIGBa0158F13.7 protein. (Os04t0480400-01)
Coordinates
chr4:+:24026635..24029050
Molecular Weight (calculated)
30293.9 Da
IEP (calculated)
5.826
GRAVY (calculated)
-1.256
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKKGKAAAA EAAAPDAGVS SPQGGGGEKE GSFLLGSPTW EDAGGGRWRC KETGHELPER EKEAYGRSRA CRLALIDQAV ARKKPPLNAF KPHPEHKSKL
101: ICNITGDIIN KSEEHIWKHI NGKRFLNKLE KLEEKMASGE MAEGEAEQSN EGENKTKSRK KKDKKKAAVV NPSLPREPKP EIDDSDNSDD PDFWVPPVGS
201: RWDDDDGKDR WTSSPVKDKD DAAEDEDGDD DGDDMADKDD KETREIASSR TKRLSVEAVG PSSFASRKKK TKKEQ
101: ICNITGDIIN KSEEHIWKHI NGKRFLNKLE KLEEKMASGE MAEGEAEQSN EGENKTKSRK KKDKKKAAVV NPSLPREPKP EIDDSDNSDD PDFWVPPVGS
201: RWDDDDGKDR WTSSPVKDKD DAAEDEDGDD DGDDMADKDD KETREIASSR TKRLSVEAVG PSSFASRKKK TKKEQ
001: MMKEKAKEGK SLFGSPTFVD LGNGRLRCVE TGHEVLAGDV ESYARNKRCR LGLINHALSL GKPPLNMFSQ CPLSRSKLVC KLTGDTVNKN EEHIWKHVNG
101: KRFLHKLEQV ERGAGSSGRT EETQVNNPRH NKEDSGSEES DFWMPKSSSD SELDEETDEE NCKGSHCDDK ESEELSERTK RMSLEIGPSS FASRKKKSKN
201: DELS
101: KRFLHKLEQV ERGAGSSGRT EETQVNNPRH NKEDSGSEES DFWMPKSSSD SELDEETDEE NCKGSHCDDK ESEELSERTK RMSLEIGPSS FASRKKKSKN
201: DELS
Arabidopsis Description
Surfeit locus protein 2 (SURF2) [Source:UniProtKB/TrEMBL;Acc:A8MRG2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.