Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
- cytosol 1
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G431100.1 | Wheat | nucleus | 47.37 | 43.6 |
| KXG34641 | Sorghum | nucleus | 51.13 | 43.04 |
| TraesCS6A01G390700.1 | Wheat | nucleus | 46.99 | 42.09 |
| HORVU6Hr1G090800.1 | Barley | nucleus | 44.74 | 37.07 |
| TraesCS6D01G377000.1 | Wheat | nucleus | 45.11 | 36.36 |
| Zm00001d019116_P001 | Maize | nucleus | 42.48 | 35.09 |
| Os07t0575000-00 | Rice | nucleus | 41.73 | 27.21 |
| Os12t0582900-01 | Rice | nucleus | 26.32 | 17.63 |
Protein Annotations
| EntrezGene:107275458 | MapMan:15.5.7.1 | MapMan:26.9.1.7 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| ProteinID:BAC79791.1 | ProteinID:BAT00527.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | EnsemblPlantsGene:Os07g0204000 | EnsemblPlants:Os07t0204000-00 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF20 | UniProt:Q7XB68 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI00001B3A2B | RefSeq:XP_015645889.1 | SEG:seg | : | : |
Description
ETHYLENE RESPONSE FACTOR 5Pathogenesis-related transcriptional factor/ERF, DNA-binding domain containing protein. (Os07t0204000-00)
Coordinates
chr7:+:5593910..5594841
Molecular Weight (calculated)
29031.0 Da
IEP (calculated)
8.395
GRAVY (calculated)
-0.590
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MELQFQKPTQ GQSQQQQCHY QVPTVTVAKN KAKTKCSSSK FVGVRQRPSG RWVAEIKDTT QKIRMWLGTF ETAEEAARAY DEAACLLRGS NTRTNFATQA
101: APDSPLASRI RTILTHKKLK KSMPQPTITF STAVYHHARS TVPAAATSTS TSGVSPSRSN SSSLNFATNL SNFAMSGGEE LQLASSQQQY DQSWALNTSL
201: LPIGDGCDMS GSNACPVASD QDKMKAEKQG SHGMNGIQEQ ETFDMGNDLC DSLWDLPPIC QLSCKY
101: APDSPLASRI RTILTHKKLK KSMPQPTITF STAVYHHARS TVPAAATSTS TSGVSPSRSN SSSLNFATNL SNFAMSGGEE LQLASSQQQY DQSWALNTSL
201: LPIGDGCDMS GSNACPVASD QDKMKAEKQG SHGMNGIQEQ ETFDMGNDLC DSLWDLPPIC QLSCKY
001: MEHQTTPKQK TKEKSKGNKT KFVGVRQRPS GKWVAEIKDT TQKIRMWLGT FETAEEAARA YDEAACLLRG SNTRTNFANH FPNNSQLSLK IRNLLHQKQS
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
Arabidopsis Description
RAP2-11Ethylene-responsive transcription factor RAP2-11 [Source:UniProtKB/Swiss-Prot;Acc:Q6J9S1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.