Factsheet for Os07t0575000-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G202100.1	Wheat	nucleus	49.02	65.36
TraesCS2A01G185600.1	Wheat	nucleus	48.53	65.13
EER99585	Sorghum	nucleus	48.28	61.95
HORVU2Hr1G037540.1	Barley	nucleus	45.59	61.79
TraesCS2B01G221700.1	Wheat	nucleus	45.59	60.59
Zm00001d006653_P001	Maize	nucleus	44.36	58.2
Zm00001d021892_P001	Maize	nucleus	42.89	56.82
Os07t0204000-00	Rice	nucleus	27.21	41.73
Os12t0582900-01	Rice	nucleus	21.08	21.66

Protein Annotations

MapMan:15.5.7.1	MapMan:26.9.1.7	Gene3D:3.30.730.10	UniProt:A0A0P0X850	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
ProteinID:BAT02279.1	ncoils:Coil	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlantsGene:Os07g0575000
EnsemblPlants:Os07t0575000-00	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31194	PANTHER:PTHR31194:SF26
SMART:SM00380	SUPFAM:SSF54171	TMHMM:TMhelix	UniParc:UPI000393873B	SEG:seg	:

Description

ETHYLENE RESPONSE FACTOR 6Pathogenesis-related transcriptional factor/ERF, DNA-binding domain containing protein. (Os07t0575000-00)

Coordinates

chr7:-:23251004..23252291

Molecular Weight (calculated)

43809.9 Da

IEP (calculated)

8.760

GRAVY (calculated)

-0.157

Length

408 amino acids

Sequence
(BLAST)

001: MELNFQVQPP VFQLQDYCYY YSQEVAAAAS PAAKPTKPRG RKKGSTSHSK FVGVRQRPSG RWVAEIKDTT QKIRMWLGTF ETADAAARAY DEAARLLRGA
101: EARTNFAPRI SPDCPLAVRI RGILHHKKLK KARSAAAATA GSPGAASKKR STTAAAAAAT PTITTTSNSN SDGAGSACGG SSSSSSSTDS CDGAVKQGGG
201: GGGAPTDASE VYRPDFVHAG AEEFDSWMFD TAFGPFPELD SFAAVDAVTP PPATASPEES SAGTPPVEMA EFERIKVERR ISASLYAMNG LQEYFDKVFD
301: ASACDPFWDF SPLRRMCFLR RLAVVVLALL LPPGSAVPMH VHVSSIGFLL QPGSAVSKRK MILLVSSWTI GYFFCAICFS FSLQDRLEIL CSKFKSFVMY
401: VKPNSDVE

Best Arabidopsis Sequence Match ( AT5G19790.1 )
(BLAST)

001: MEHQTTPKQK TKEKSKGNKT KFVGVRQRPS GKWVAEIKDT TQKIRMWLGT FETAEEAARA YDEAACLLRG SNTRTNFANH FPNNSQLSLK IRNLLHQKQS
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT

Arabidopsis Description

RAP2-11Ethylene-responsive transcription factor RAP2-11 [Source:UniProtKB/Swiss-Prot;Acc:Q6J9S1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.