Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d006653_P001 | Maize | nucleus | 75.32 | 74.6 |
| EER99585 | Sorghum | nucleus | 69.48 | 67.3 |
| HORVU2Hr1G037540.1 | Barley | nucleus | 58.44 | 59.8 |
| TraesCS2A01G185600.1 | Wheat | nucleus | 58.12 | 58.88 |
| TraesCS2D01G202100.1 | Wheat | nucleus | 57.14 | 57.52 |
| TraesCS2B01G221700.1 | Wheat | nucleus | 55.84 | 56.03 |
| Os07t0575000-00 | Rice | nucleus | 56.82 | 42.89 |
| Zm00001d019116_P001 | Maize | nucleus | 35.06 | 33.54 |
| Zm00001d021214_P001 | Maize | plastid | 17.86 | 25.23 |
| Zm00001d033353_P001 | Maize | nucleus | 28.57 | 21.05 |
| Zm00001d030862_P001 | Maize | plastid | 26.62 | 19.81 |
Protein Annotations
| EntrezGene:100273192 | MapMan:15.5.7.1 | MapMan:26.9.1.7 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| UniProt:B4FTH7 | EMBL:BT040415 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | ProteinID:ONM59004.1 | PFAM:PF00847 | PRINTS:PR00367 |
| PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF26 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00017B76DD |
| EnsemblPlantsGene:Zm00001d021892 | EnsemblPlants:Zm00001d021892_P001 | EnsemblPlants:Zm00001d021892_T001 | SEG:seg | : | : |
Description
AP2-EREBP-transcription factor 201Ethylene-responsive transcription factor RAP2-11
Coordinates
chr7:-:165528436..165529362
Molecular Weight (calculated)
33023.0 Da
IEP (calculated)
7.180
GRAVY (calculated)
-0.562
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MELHFQAQPP VFQLENYSSS SSYYYYQQQE AAAQAKPSKP RGRKKGSNNH SKFVGVRQRP SGRWVAEIKD TTQKIRMWLG TFETAEAAAK AYDEAARLLR
101: GTDARTNFAP RISPDCPLAV RIRGLLHHKK IKKAKAAAAA AKQQASSSSP ASTTSNSNSN SHSTNSARGG GSSITTTTTS SSSSSSSSSA VSCDDDMATQ
201: GGGTGALDAG EVYRPGFATA GTEEEFDSWM FDSAFPALDS FAAVDSAVPA AGTTEEPGAE MAEFERIKVE RRISASLYAM NGLQEYFDRV LDASACDSLW
301: DLSPLCHH
101: GTDARTNFAP RISPDCPLAV RIRGLLHHKK IKKAKAAAAA AKQQASSSSP ASTTSNSNSN SHSTNSARGG GSSITTTTTS SSSSSSSSSA VSCDDDMATQ
201: GGGTGALDAG EVYRPGFATA GTEEEFDSWM FDSAFPALDS FAAVDSAVPA AGTTEEPGAE MAEFERIKVE RRISASLYAM NGLQEYFDRV LDASACDSLW
301: DLSPLCHH
001: MEHQTTPKQK TKEKSKGNKT KFVGVRQRPS GKWVAEIKDT TQKIRMWLGT FETAEEAARA YDEAACLLRG SNTRTNFANH FPNNSQLSLK IRNLLHQKQS
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
Arabidopsis Description
RAP2-11Ethylene-responsive transcription factor RAP2-11 [Source:UniProtKB/Swiss-Prot;Acc:Q6J9S1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.