Factsheet for Zm00001d021214_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97067	Sorghum	plastid	73.85	66.26
TraesCS5A01G312400.1	Wheat	plastid	48.62	47.11
TraesCS5D01G319200.1	Wheat	plastid	48.62	46.9
TraesCS5B01G313300.1	Wheat	plastid	47.71	46.02
GSMUA_Achr3P12350_001	Banana	mitochondrion	26.61	44.96
TraesCS1B01G281500.1	Wheat	cytosol, mitochondrion, nucleus, plastid	27.98	33.52
KRH48263	Soybean	plastid	39.91	26.13
KRH65161	Soybean	plastid	39.45	25.22
PGSC0003DMT400043930	Potato	nucleus	32.57	25.18
Solyc01g091760.2.1	Tomato	nucleus	33.49	25.09
Zm00001d006653_P001	Maize	nucleus	25.69	18.01
Zm00001d021892_P001	Maize	nucleus	25.23	17.86
Zm00001d019116_P001	Maize	nucleus	25.69	17.39
Zm00001d033353_P001	Maize	nucleus	28.44	14.83
Zm00001d030862_P001	Maize	plastid	27.06	14.25

Protein Annotations

EntrezGene:103634250	MapMan:15.5.7.1	MapMan:26.9.1.7	Gene3D:3.30.730.10	UniProt:A0A1D6I938	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	ProteinID:ONM56547.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31194	PANTHER:PTHR31194:SF7	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000220BA3F	EnsemblPlantsGene:Zm00001d021214
EnsemblPlants:Zm00001d021214_P001	EnsemblPlants:Zm00001d021214_T001	SEG:seg	:	:	:

Description

AP2-EREBP-transcription factor 88Ethylene-responsive transcription factor RAP2-11

Coordinates

chr7:+:146343053..146343709

Molecular Weight (calculated)

22965.7 Da

IEP (calculated)

10.416

GRAVY (calculated)

-0.346

Length

218 amino acids

Sequence
(BLAST)

001: MATTQDSGRT ASATALTTSR GRRFVGVRQR PSGRWVAEIK DSAQRVRLWL GTFDTADEAA RAYDEAARAL RGENTRTNFA DRARHGGPAG AGSGAARARL
101: SKNLQHVMAR AAAAGRATAC AGVGDQFALA AVFRHPVAAQ QQVKHAVQPS FVVPRRTEAP PLSSVPAGGG EVWRVDDVDT ADESLCAAEE RSFKVSSSVI
201: VPPSFSASSS ESFGLDDL

Best Arabidopsis Sequence Match ( AT5G19790.1 )
(BLAST)

001: MEHQTTPKQK TKEKSKGNKT KFVGVRQRPS GKWVAEIKDT TQKIRMWLGT FETAEEAARA YDEAACLLRG SNTRTNFANH FPNNSQLSLK IRNLLHQKQS
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT

Arabidopsis Description

RAP2-11Ethylene-responsive transcription factor RAP2-11 [Source:UniProtKB/Swiss-Prot;Acc:Q6J9S1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.