CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 5
plastid 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH65161	Soybean	plastid	55.56	54.25
TraesCS1A01G434500.1	Wheat	nucleus	13.21	53.66
GSMUA_Achr3P12350_001	Banana	mitochondrion	18.92	48.84
Zm00001d021214_P001	Maize	plastid	26.13	39.91
TraesCS5D01G319200.1	Wheat	plastid	24.92	36.73
EER97067	Sorghum	plastid	26.73	36.63
PGSC0003DMT400043930	Potato	nucleus	30.93	36.52
TraesCS5B01G313300.1	Wheat	plastid	24.62	36.28
TraesCS5A01G312400.1	Wheat	plastid	24.32	36.0
KRH56725	Soybean	nucleus	17.42	28.43
Solyc01g091760.2.1	Tomato	nucleus	24.32	27.84
KRH03847	Soybean	nucleus	18.02	23.9
TraesCS1B01G281500.1	Wheat	cytosol, mitochondrion, nucleus, plastid	12.31	22.53
KRH58943	Soybean	nucleus	15.92	21.29
KRG94843	Soybean	nucleus, plastid	16.52	20.0
KRH11052	Soybean	nucleus	21.62	19.89
KRH06691	Soybean	nucleus, plastid	16.52	19.3
KRG89549	Soybean	nucleus	18.62	18.56
KRH18447	Soybean	nucleus	21.02	16.99
KRG93579	Soybean	nucleus	21.02	16.71
KRH70168	Soybean	nucleus	15.62	16.1
KRH08506	Soybean	nucleus	16.22	16.07
KRH01227	Soybean	nucleus	19.52	15.74
KRH42840	Soybean	plastid	3.6	8.0

Protein Annotations

EntrezGene:100799444	MapMan:15.5.7.1	MapMan:26.9.1.7	Gene3D:3.30.730.10	EMBL:ACUP02004216	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	ncoils:Coil	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_07G078600	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:K7L0B7	EnsemblPlants:KRH48263
ProteinID:KRH48263	ProteinID:KRH48263.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31194
PANTHER:PTHR31194:SF7	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002338C3E	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:-:7158821..7160401

Molecular Weight (calculated)

35883.2 Da

IEP (calculated)

8.283

GRAVY (calculated)

-0.640

Length

333 amino acids

Sequence
(BLAST)

001: MAGAEATKYA SSATSPTTTA ANNMATKSNK PTIRRFIGVR QRPSGRWVAE IKDSSQHVRL WLGTYDTPEE AARAYDEAAR ALRGENARTN FAPVSQVILG
101: QQQSGSNNNL STGSDIGKHG LSFASLKAKL SKNLQNIMAR ASDHNNNNKS SKSRVSDHFT FASIFHRRSY QIPEGDTMKN IDKVVQPSII VPPMEAGGVG
201: DYNSSVANWE SASSVSDCSS EWVGFGNSKL GLESDGYEIG EASVGDQGFL EQLMGWIETP DISDHQGEGS RSKRFKVSSS VLVPPTFTGS SYDCGSPFSG
301: YASPYNNGYA SPYNNGCASP CNGYASPYYN NKK

Best Arabidopsis Sequence Match ( AT5G19790.1 )
(BLAST)

001: MEHQTTPKQK TKEKSKGNKT KFVGVRQRPS GKWVAEIKDT TQKIRMWLGT FETAEEAARA YDEAACLLRG SNTRTNFANH FPNNSQLSLK IRNLLHQKQS
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT

Arabidopsis Description

RAP2-11Ethylene-responsive transcription factor RAP2-11 [Source:UniProtKB/Swiss-Prot;Acc:Q6J9S1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.