Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH56725 | Soybean | nucleus | 42.23 | 51.96 |
| PGSC0003DMT400063264 | Potato | nucleus | 32.27 | 45.76 |
| Solyc03g114440.1.1 | Tomato | plastid | 29.88 | 41.9 |
| VIT_17s0000g04480.t01 | Wine grape | nucleus | 28.69 | 31.44 |
| KRH58943 | Soybean | nucleus | 20.72 | 20.88 |
| KRG94843 | Soybean | nucleus, plastid | 20.32 | 18.55 |
| KRH48263 | Soybean | plastid | 23.9 | 18.02 |
| KRH06691 | Soybean | nucleus, plastid | 20.32 | 17.89 |
| KRH65161 | Soybean | plastid | 22.31 | 16.42 |
| KRH11052 | Soybean | nucleus | 23.11 | 16.02 |
| KRH08506 | Soybean | nucleus | 19.52 | 14.58 |
| KRG89549 | Soybean | nucleus | 19.12 | 14.37 |
| KRH70168 | Soybean | nucleus | 17.93 | 13.93 |
| KRH01227 | Soybean | nucleus | 22.31 | 13.56 |
| KRG93579 | Soybean | nucleus | 21.51 | 12.89 |
| KRH18447 | Soybean | nucleus | 21.12 | 12.86 |
| KRH42840 | Soybean | plastid | 3.59 | 6.0 |
Protein Annotations
| EntrezGene:100800716 | MapMan:15.5.7.1 | MapMan:26.9.1.7 | Gene3D:3.30.730.10 | UniProt:A0A0R0FBW6 | EMBL:ACUP02010364 |
| InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | EnsemblPlantsGene:GLYMA_17G124100 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | EnsemblPlants:KRH03847 | ProteinID:KRH03847 |
| ProteinID:KRH03847.1 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF1 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0006EDB0EB | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr17:-:9904676..9905746
Molecular Weight (calculated)
28356.0 Da
IEP (calculated)
9.220
GRAVY (calculated)
-0.478
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLPHHRPHC YIKGFITHQC SPSSHIYAKI QPNPFFFLPT LMENIDTSKF SHQSQNQNKN NIPLMSIEIL DKSYEKRVVN KVPKVANKSE KKFLGVRQRP
101: SGRWIAEIKD SSQKLRLWLG TFDKAEEAAL AYDCAARLLR GRNAKTNFPN NPGIMNTTHE EDCSILGKNP RAYQLLKHAV MKNNHALYST VMPWKNQIMV
201: RDEFDTLVEE TIVCSIPEQG SGCCGISFGS SKVYSSVVVA PSFSASHDET S
101: SGRWIAEIKD SSQKLRLWLG TFDKAEEAAL AYDCAARLLR GRNAKTNFPN NPGIMNTTHE EDCSILGKNP RAYQLLKHAV MKNNHALYST VMPWKNQIMV
201: RDEFDTLVEE TIVCSIPEQG SGCCGISFGS SKVYSSVVVA PSFSASHDET S
001: MEHQTTPKQK TKEKSKGNKT KFVGVRQRPS GKWVAEIKDT TQKIRMWLGT FETAEEAARA YDEAACLLRG SNTRTNFANH FPNNSQLSLK IRNLLHQKQS
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
Arabidopsis Description
RAP2-11Ethylene-responsive transcription factor RAP2-11 [Source:UniProtKB/Swiss-Prot;Acc:Q6J9S1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.