CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94843	Soybean	nucleus, plastid	74.74	77.45
VIT_08s0007g07250.t01	Wine grape	plastid	55.44	60.77
KRH70168	Soybean	nucleus	50.88	44.89
PGSC0003DMT400021535	Potato	nucleus	42.11	44.61
KRH08506	Soybean	nucleus	52.28	44.35
PGSC0003DMT400060936	Potato	nucleus	41.75	43.12
Solyc10g080650.1.1	Tomato	nucleus	37.54	42.97
Solyc10g078610.1.1	Tomato	nucleus	43.16	42.27
KRH58943	Soybean	nucleus	29.82	34.14
KRH56725	Soybean	nucleus	20.35	28.43
KRG89549	Soybean	nucleus	27.37	23.35
KRH01227	Soybean	nucleus	31.23	21.55
KRG93579	Soybean	nucleus	31.23	21.24
KRH18447	Soybean	nucleus	30.53	21.12
KRH42840	Soybean	plastid	10.88	20.67
KRH03847	Soybean	nucleus	17.89	20.32
KRH11052	Soybean	nucleus	21.75	17.13
KRH48263	Soybean	plastid	19.3	16.52
KRH65161	Soybean	plastid	19.3	16.13

Protein Annotations

EntrezGene:100782886	MapMan:15.5.7.1	MapMan:26.9.1.7	Gene3D:3.30.730.10	UniProt:A0A0R0FU29	EMBL:ACUP02009858
InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	EnsemblPlantsGene:GLYMA_16G040000	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlants:KRH06691	ProteinID:KRH06691
ProteinID:KRH06691.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31194	PANTHER:PTHR31194:SF20
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000233EA75	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr16:+:3754510..3755367

Molecular Weight (calculated)

31543.6 Da

IEP (calculated)

7.843

GRAVY (calculated)

-0.702

Length

285 amino acids

Sequence
(BLAST)

001: MEIQFQQPNL QQQKSGIAIT KGGKLKGRSR SNNTNKFVGV RQRPSGRWVA EIKDTTQKIR MWLGTFETAE EAARAYDEAA CLLRGSNTRT NFITHVSLDS
101: PLASRIRNLL NNRKGVKKQE DTNANANNAP APKVTTTRSA STCTSTSTST STSTSSNSSN GNDKNDKSLS TANTRSSNLF DDAYKPDLSN CREEFESGHQ
201: SNASWGFGTV FDRFPIAQIL DIPKIDDGLL TNAADLELSE FERMKVERQI SASLYAINGV QEYMETVQDS NDTLWDLPPL CSMFC

Best Arabidopsis Sequence Match ( AT5G19790.1 )
(BLAST)

001: MEHQTTPKQK TKEKSKGNKT KFVGVRQRPS GKWVAEIKDT TQKIRMWLGT FETAEEAARA YDEAACLLRG SNTRTNFANH FPNNSQLSLK IRNLLHQKQS
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT

Arabidopsis Description

RAP2-11Ethylene-responsive transcription factor RAP2-11 [Source:UniProtKB/Swiss-Prot;Acc:Q6J9S1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.