Factsheet for TraesCS5A01G312400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G319200.1	Wheat	plastid	96.89	96.46
TraesCS5B01G313300.1	Wheat	plastid	95.11	94.69
TraesCS1B01G281500.1	Wheat	cytosol, mitochondrion, nucleus, plastid	57.33	70.88
TraesCS1A01G434500.1	Wheat	nucleus	21.78	59.76
Zm00001d021214_P001	Maize	plastid	47.11	48.62
EER97067	Sorghum	plastid	48.44	44.86
GSMUA_Achr3P12350_001	Banana	mitochondrion	24.44	42.64
PGSC0003DMT400043930	Potato	nucleus	31.11	24.82
KRH48263	Soybean	plastid	36.0	24.32
KRH65161	Soybean	plastid	35.11	23.17
Solyc01g091760.2.1	Tomato	nucleus	28.44	21.99
TraesCS6A01G390700.1	Wheat	nucleus	22.67	17.17
TraesCS2A01G185600.1	Wheat	nucleus	21.78	16.12
TraesCS5A01G071300.1	Wheat	nucleus, plastid	23.56	12.71
TraesCS4A01G236300.1	Wheat	nucleus	23.11	12.56

Protein Annotations

MapMan:15.5.7.1	MapMan:26.9.1.7	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31194	PANTHER:PTHR31194:SF7
SMART:SM00380	SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS5A01G312400	EnsemblPlants:TraesCS5A01G312400.1	TIGR:cd00018	SEG:seg

Description

No Description!

Coordinates

chr5A:-:523878871..523879750

Molecular Weight (calculated)

23514.4 Da

IEP (calculated)

8.933

GRAVY (calculated)

-0.266

Length

225 amino acids

Sequence
(BLAST)

001: MAAQESGRSA ASATATMTVC RGRRFLGVRQ RPSGRWVAEI KDSVQRVRLW LGTFDTAEDA ACAYDEAARA LRGDNTRTNF AARHGAAARA RLSKNLQHVM
101: ARAAAGRSPS ARGAGVGDQF ALAAVFRDWQ QPAVSPQLPL GCRAEAETAH VAASAVQPSF VVPRRTEAPP SDTAGGAGDD AWAADVLELD GGGETNAEKA
201: FKVSSSVIVP SKFGAAPESF GLDGF

Best Arabidopsis Sequence Match ( AT5G19790.1 )
(BLAST)

001: MEHQTTPKQK TKEKSKGNKT KFVGVRQRPS GKWVAEIKDT TQKIRMWLGT FETAEEAARA YDEAACLLRG SNTRTNFANH FPNNSQLSLK IRNLLHQKQS
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT

Arabidopsis Description

RAP2-11Ethylene-responsive transcription factor RAP2-11 [Source:UniProtKB/Swiss-Prot;Acc:Q6J9S1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.