Factsheet for TraesCS2A01G185600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G202100.1	Wheat	nucleus	96.05	95.42
TraesCS2B01G221700.1	Wheat	nucleus	87.17	86.32
HORVU2Hr1G037540.1	Barley	nucleus	76.97	77.74
Zm00001d006653_P001	Maize	nucleus	60.2	58.84
EER99585	Sorghum	nucleus	60.86	58.18
Zm00001d021892_P001	Maize	nucleus	58.88	58.12
Os07t0575000-00	Rice	nucleus	65.13	48.53
TraesCS1A01G434500.1	Wheat	nucleus	12.83	47.56
TraesCS6A01G390700.1	Wheat	nucleus	32.24	33.0
TraesCS5A01G312400.1	Wheat	plastid	16.12	21.78
TraesCS4A01G236300.1	Wheat	nucleus	28.29	20.77
TraesCS5A01G071300.1	Wheat	nucleus, plastid	26.64	19.42

Protein Annotations

MapMan:15.5.7.1	MapMan:26.9.1.7	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ncoils:Coil
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31194
PANTHER:PTHR31194:SF26	SMART:SM00380	SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS2A01G185600	EnsemblPlants:TraesCS2A01G185600.1	TIGR:cd00018
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:146824480..146825394

Molecular Weight (calculated)

32480.1 Da

IEP (calculated)

7.801

GRAVY (calculated)

-0.397

Length

304 amino acids

Sequence
(BLAST)

001: MELHFQVQPP ALQLQDYCYY YQQQQEAAAV AAQAKPTKPR GRKKGSTSHS KFVGVRQRPS GRWVAEIKDT TQKIRMWLGT FETADAAARA YDEAARLLRG
101: AEARTNFAPR ISPDCPLAVR IRGLLHHKKL KKARLPAASA KIPGPSSTPA APAAYTTSNS NSNSNSMDGA CGGASSSSSS SAVSCDGAMK QGGGAPDAGE
201: VYRPDFAAPV AGAEELESWM FESSFGQFPA LDGFAAVDAC TLPAASPEET SAAPAAGMVE FERMKVERRI SASLYAMNGL QEYFDRVFEA SAGDPLWDLS
301: PLCQ

Best Arabidopsis Sequence Match ( AT5G19790.1 )
(BLAST)

001: MEHQTTPKQK TKEKSKGNKT KFVGVRQRPS GKWVAEIKDT TQKIRMWLGT FETAEEAARA YDEAACLLRG SNTRTNFANH FPNNSQLSLK IRNLLHQKQS
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT

Arabidopsis Description

RAP2-11Ethylene-responsive transcription factor RAP2-11 [Source:UniProtKB/Swiss-Prot;Acc:Q6J9S1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.