Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G077500.1 | Wheat | nucleus | 85.99 | 86.83 |
| TraesCS4B01G078700.1 | Wheat | nucleus | 83.33 | 83.74 |
| HORVU4Hr1G013410.1 | Barley | nucleus | 67.87 | 73.75 |
| Zm00001d033353_P001 | Maize | nucleus | 49.76 | 49.28 |
| TraesCS1A01G434500.1 | Wheat | nucleus | 9.42 | 47.56 |
| TraesCS5A01G071300.1 | Wheat | nucleus, plastid | 40.58 | 40.29 |
| OQU91384 | Sorghum | nucleus | 46.38 | 36.71 |
| TraesCS2A01G185600.1 | Wheat | nucleus | 20.77 | 28.29 |
| TraesCS6A01G390700.1 | Wheat | nucleus | 20.05 | 27.95 |
| TraesCS5A01G312400.1 | Wheat | plastid | 12.56 | 23.11 |
Protein Annotations
| MapMan:15.5.7.1 | MapMan:26.9.1.7 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 |
| InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF41 |
| SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS4A01G236300 | EnsemblPlants:TraesCS4A01G236300.1 | TIGR:cd00018 | SEG:seg |
Description
No Description!
Coordinates
chr4A:-:545105716..545106960
Molecular Weight (calculated)
44386.0 Da
IEP (calculated)
4.505
GRAVY (calculated)
-0.483
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMKRKLSPT EADLAADDHH QPDTASVTTA TGPEPWAATV GAAAAAQRAR KRFVGVRQRP SGRWVAEIKD TIQKIRVWLG TFDTAEEAAR AYDEAACLLR
101: GANTRTNFWP RAAAPAAASD GHGGAGLAEN HGHLHHHTPP PSALPSKVTN LLLLRLKRAR SISDEHHISA SATAQEALGQ QQQDQEEYGA GNFHVDDFLS
201: YDSNVDEHGV VKYEEDFHCP RDADDEEEDV SEEEEEAPLD FGFMDAHPSP PGDVGDAGLF APFEMMAAEI GGAVEAEAEA SEYGGGENEN SAAIHEVMKR
301: MKYERKISAS LYALSGVPEC LRLRLGNSGA VGHGLALSGL RDACMRKRQE QNQEAVVDCV EGGHEESSSS NSSSSSEVAS CSPEAVISSP NADAVDSDVV
401: MWSSFDLALI CFMS
101: GANTRTNFWP RAAAPAAASD GHGGAGLAEN HGHLHHHTPP PSALPSKVTN LLLLRLKRAR SISDEHHISA SATAQEALGQ QQQDQEEYGA GNFHVDDFLS
201: YDSNVDEHGV VKYEEDFHCP RDADDEEEDV SEEEEEAPLD FGFMDAHPSP PGDVGDAGLF APFEMMAAEI GGAVEAEAEA SEYGGGENEN SAAIHEVMKR
301: MKYERKISAS LYALSGVPEC LRLRLGNSGA VGHGLALSGL RDACMRKRQE QNQEAVVDCV EGGHEESSSS NSSSSSEVAS CSPEAVISSP NADAVDSDVV
401: MWSSFDLALI CFMS
001: MEHQTTPKQK TKEKSKGNKT KFVGVRQRPS GKWVAEIKDT TQKIRMWLGT FETAEEAARA YDEAACLLRG SNTRTNFANH FPNNSQLSLK IRNLLHQKQS
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
Arabidopsis Description
RAP2-11Ethylene-responsive transcription factor RAP2-11 [Source:UniProtKB/Swiss-Prot;Acc:Q6J9S1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.