Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G236300.1 | Wheat | nucleus | 73.75 | 67.87 |
| TraesCS4B01G078700.1 | Wheat | nucleus | 72.7 | 67.23 |
| TraesCS4D01G077500.1 | Wheat | nucleus | 71.65 | 66.59 |
| Zm00001d033353_P001 | Maize | nucleus | 52.49 | 47.85 |
| HORVU5Hr1G018720.1 | Barley | nucleus | 41.47 | 37.89 |
| OQU91384 | Sorghum | nucleus | 47.24 | 34.42 |
| HORVU2Hr1G037540.1 | Barley | nucleus | 21.26 | 26.91 |
| HORVU6Hr1G090800.1 | Barley | nucleus | 21.52 | 25.55 |
Protein Annotations
| MapMan:15.5.7.1 | MapMan:26.9.1.7 | Gene3D:3.30.730.10 | UniProt:A0A287N9T8 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU4Hr1G013410 |
| EnsemblPlants:HORVU4Hr1G013410.1 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31194 | PANTHER:PTHR31194:SF41 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000B4800B6 | SEG:seg |
Description
No Description!
Coordinates
chrchr4H:-:46577015..46578515
Molecular Weight (calculated)
41287.3 Da
IEP (calculated)
4.780
GRAVY (calculated)
-0.647
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGSEPWAA TVGAVAAAQR ARKRFVGVRQ RPSGRWVAEI KDTIQKIRVW LGTFDTAEEA ARAYDEAACL LRGANTRTNF WPSTATSDGG AGLTENHGHL
101: HHHTPPPSAL PSKVTNLLRR RLKRARSISD EHHISASATA QEALGQQQQR QEQEQEEYGA SSFQVDDFFS YDSNVDEHGV VKYEEDSPHC SRHAEDEEDD
201: VSEEEEAPLD FGFMDAHPPP PGHVGDAGLF SPFEMMAAVE GETETTEYGG GGGENSAAIH EVTKRMKYER KISASLYALS GVSECLRLRL GNSGAGGHEL
301: ALSGLRDACM KKRQEQNQEA VVDRVEGRGH EESSSSNSSS SSDVASCPPE AGTISSPSAD DVDSDVVMWS SLHLAPICFM S
101: HHHTPPPSAL PSKVTNLLRR RLKRARSISD EHHISASATA QEALGQQQQR QEQEQEEYGA SSFQVDDFFS YDSNVDEHGV VKYEEDSPHC SRHAEDEEDD
201: VSEEEEAPLD FGFMDAHPPP PGHVGDAGLF SPFEMMAAVE GETETTEYGG GGGENSAAIH EVTKRMKYER KISASLYALS GVSECLRLRL GNSGAGGHEL
301: ALSGLRDACM KKRQEQNQEA VVDRVEGRGH EESSSSNSSS SSDVASCPPE AGTISSPSAD DVDSDVVMWS SLHLAPICFM S
001: MEHQTTPKQK TKEKSKGNKT KFVGVRQRPS GKWVAEIKDT TQKIRMWLGT FETAEEAARA YDEAACLLRG SNTRTNFANH FPNNSQLSLK IRNLLHQKQS
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
Arabidopsis Description
RAP2-11Ethylene-responsive transcription factor RAP2-11 [Source:UniProtKB/Swiss-Prot;Acc:Q6J9S1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.