Factsheet for Zm00001d033353_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
mitochondrion 2
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G013410.1	Barley	nucleus	47.85	52.49
TraesCS4B01G078700.1	Wheat	nucleus	49.52	50.24
TraesCS4D01G077500.1	Wheat	nucleus	49.04	50.0
TraesCS4A01G236300.1	Wheat	nucleus	49.28	49.76
Zm00001d030862_P001	Maize	plastid	42.11	42.51
OQU91384	Sorghum	nucleus	48.09	38.43
Zm00001d021892_P001	Maize	nucleus	21.05	28.57
Zm00001d021214_P001	Maize	plastid	14.83	28.44
Zm00001d006653_P001	Maize	nucleus	19.86	26.69
Zm00001d019116_P001	Maize	nucleus	18.66	24.22

Protein Annotations

EntrezGene:103645487	MapMan:15.5.7.1	MapMan:26.9.1.7	Gene3D:3.30.730.10	UniProt:A0A060D1N0	ProteinID:AIB05195.1
InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	ProteinID:ONM07289.1	PFAM:PF00847	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31194	PANTHER:PTHR31194:SF41	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002216EED
EnsemblPlantsGene:Zm00001d033353	EnsemblPlants:Zm00001d033353_P001	EnsemblPlants:Zm00001d033353_T001	SEG:seg	:	:

Description

AP2-EREBP-transcription factor 142Ethylene-responsive transcription factor RAP2-11

Coordinates

chr1:-:260045773..260047029

Molecular Weight (calculated)

44439.7 Da

IEP (calculated)

4.772

GRAVY (calculated)

-0.422

Length

418 amino acids

Sequence
(BLAST)

001: MALKRKACPS LADDNHCLAT ANCFAPAAAV GAVAAVQRAR KRFVGVRQRP SGRWVAEIKD TIQKIRVWLG TFDTAEEAAR AYDEAACLLR GSNTRTNFWP
101: RAAAVPAVAA AMAPPHHQLV APAAPSALPS KVTNLLLLHL KKARGASAVG VTREAPAQHH QQGYGGGGGG GPEEYSFQVD DFLSYDSTSD EHGVVVKHEE
201: GSTCSQETED DGDEGEVVVA CKEVDDTDAP LDFGFMDKRP SPAGGDADGA AGLYSPFEMV AADLGDVDAV EMQPLPTYGS EGAGEPSAAI HEVMKRMKYE
301: RKISASLYAL SGVSECLRMR VGDGDDHATA AKHELALSGL RDACRSKRQQ QEQEQRLEVK DTEGNVVGHE ECSSCSNSFS SEATSSSPEA ANNPPPQEAK
401: AVDSDMLLWS SLDLPPIY

Best Arabidopsis Sequence Match ( AT5G19790.1 )
(BLAST)

001: MEHQTTPKQK TKEKSKGNKT KFVGVRQRPS GKWVAEIKDT TQKIRMWLGT FETAEEAARA YDEAACLLRG SNTRTNFANH FPNNSQLSLK IRNLLHQKQS
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT

Arabidopsis Description

RAP2-11Ethylene-responsive transcription factor RAP2-11 [Source:UniProtKB/Swiss-Prot;Acc:Q6J9S1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.