Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G077500.1 | Wheat | nucleus | 89.56 | 90.0 |
| TraesCS4A01G236300.1 | Wheat | nucleus | 83.74 | 83.33 |
| HORVU4Hr1G013410.1 | Barley | nucleus | 67.23 | 72.7 |
| Zm00001d033353_P001 | Maize | nucleus | 50.24 | 49.52 |
| TraesCS5B01G077300.1 | Wheat | nucleus | 40.29 | 39.9 |
| OQU91384 | Sorghum | nucleus | 45.87 | 36.14 |
| TraesCS6B01G431100.1 | Wheat | nucleus | 18.93 | 26.99 |
| TraesCS2B01G221700.1 | Wheat | nucleus | 18.93 | 25.41 |
| TraesCS5B01G313300.1 | Wheat | plastid | 12.86 | 23.45 |
| TraesCS1B01G281500.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 5.58 | 12.64 |
Protein Annotations
| MapMan:15.5.7.1 | MapMan:26.9.1.7 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 |
| InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF41 |
| SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS4B01G078700 | EnsemblPlants:TraesCS4B01G078700.1 | TIGR:cd00018 | SEG:seg |
Description
No Description!
Coordinates
chr4B:+:75756909..75758147
Molecular Weight (calculated)
44239.8 Da
IEP (calculated)
4.562
GRAVY (calculated)
-0.492
Length
412 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMKRKLSPT EADLASDDHH KADTSSFTTA SGPEPWAATV GAVAAAQRAR KRFVGVRQRP SGRWVAEIKD TIQKIRVWLG TFDTVEEAAR AYDEAACLLR
101: GSNTRTNFWP RAAAPAATSD GGAGLTENHG HLHHHTPPSS ALPSKVTNLL LLRLKRARSI SDEHISASAT AQGALGQQEQ QQEEYGAGSF HVDDFLSYDS
201: NVDEHGVVKY EEDSHCSRDA EDDEEDVSEE EEEAPLDFGF MDAHPSPPGD VGHAGLFSPF EMMAAEIGGA VEAETEASEY GGGENENSMA IHEVMKRMKY
301: ERKISASLYA LSGVSECLHL RLGNNSGAVG HGLALSGLRD ACMKKRQEQN QEAVVDCVEG GHEESSNSNS SSSSEVASCS LEAVISSPNA DAVDSDVVMW
401: SSLDLAPICF MS
101: GSNTRTNFWP RAAAPAATSD GGAGLTENHG HLHHHTPPSS ALPSKVTNLL LLRLKRARSI SDEHISASAT AQGALGQQEQ QQEEYGAGSF HVDDFLSYDS
201: NVDEHGVVKY EEDSHCSRDA EDDEEDVSEE EEEAPLDFGF MDAHPSPPGD VGHAGLFSPF EMMAAEIGGA VEAETEASEY GGGENENSMA IHEVMKRMKY
301: ERKISASLYA LSGVSECLHL RLGNNSGAVG HGLALSGLRD ACMKKRQEQN QEAVVDCVEG GHEESSNSNS SSSSEVASCS LEAVISSPNA DAVDSDVVMW
401: SSLDLAPICF MS
001: MEHQTTPKQK TKEKSKGNKT KFVGVRQRPS GKWVAEIKDT TQKIRMWLGT FETAEEAARA YDEAACLLRG SNTRTNFANH FPNNSQLSLK IRNLLHQKQS
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
Arabidopsis Description
RAP2-11Ethylene-responsive transcription factor RAP2-11 [Source:UniProtKB/Swiss-Prot;Acc:Q6J9S1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.