Factsheet for TraesCS2B01G221700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G202100.1	Wheat	nucleus	87.62	87.91
TraesCS2A01G185600.1	Wheat	nucleus	86.32	87.17
HORVU2Hr1G037540.1	Barley	nucleus	73.94	75.42
Zm00001d006653_P001	Maize	nucleus	57.33	56.59
Zm00001d021892_P001	Maize	nucleus	56.03	55.84
EER99585	Sorghum	nucleus	57.65	55.66
Os07t0575000-00	Rice	nucleus	60.59	45.59
TraesCS6B01G431100.1	Wheat	nucleus	34.2	36.33
TraesCS5B01G313300.1	Wheat	plastid	15.31	20.8
TraesCS5B01G077300.1	Wheat	nucleus	26.71	19.71
TraesCS4B01G078700.1	Wheat	nucleus	25.41	18.93
TraesCS1B01G281500.1	Wheat	cytosol, mitochondrion, nucleus, plastid	7.82	13.19

Protein Annotations

MapMan:15.5.7.1	MapMan:26.9.1.7	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ncoils:Coil
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31194
PANTHER:PTHR31194:SF26	SMART:SM00380	SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS2B01G221700	EnsemblPlants:TraesCS2B01G221700.1	TIGR:cd00018
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:+:211613861..211615099

Molecular Weight (calculated)

32889.5 Da

IEP (calculated)

7.801

GRAVY (calculated)

-0.408

Length

307 amino acids

Sequence
(BLAST)

001: MELHFQVQPP VLQLQDYCYY YQQQQEAAAA AAQAKPTKPR GRKKGSTSHS KFVGVRQRPS GRWVAEIKDT TQKIRMWLGT FETADAAARA YDEAARLLRG
101: AEARTNFAPR ISPDCPLAVR IRGLLHHKKL KKARLPAASA KIPGSSSTPP APAAYATSNS NSNSNSNSNS MDGACGGASS SSSSSALSCD GAMKQGGGAL
201: DAGEVYRPDF APVAGTEELE SWMFESSFGQ FPALDGFAAV DACTLPAAST EETSVAPAAG MVEFERMKVE RRISASLYAM NGLQEYFDRV FEASAGDPLW
301: DLSPLCQ

Best Arabidopsis Sequence Match ( AT5G19790.1 )
(BLAST)

001: MEHQTTPKQK TKEKSKGNKT KFVGVRQRPS GKWVAEIKDT TQKIRMWLGT FETAEEAARA YDEAACLLRG SNTRTNFANH FPNNSQLSLK IRNLLHQKQS
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT

Arabidopsis Description

RAP2-11Ethylene-responsive transcription factor RAP2-11 [Source:UniProtKB/Swiss-Prot;Acc:Q6J9S1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.