Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G185600.1 | Wheat | nucleus | 77.74 | 76.97 |
| TraesCS2D01G202100.1 | Wheat | nucleus | 76.08 | 74.84 |
| TraesCS2B01G221700.1 | Wheat | nucleus | 75.42 | 73.94 |
| Zm00001d006653_P001 | Maize | nucleus | 60.47 | 58.52 |
| Zm00001d021892_P001 | Maize | nucleus | 59.8 | 58.44 |
| EER99585 | Sorghum | nucleus | 60.47 | 57.23 |
| Os07t0575000-00 | Rice | nucleus | 61.79 | 45.59 |
| HORVU6Hr1G090800.1 | Barley | nucleus | 33.22 | 31.15 |
| HORVU4Hr1G013410.1 | Barley | nucleus | 26.91 | 21.26 |
| HORVU5Hr1G018720.1 | Barley | nucleus | 27.24 | 19.66 |
Protein Annotations
| MapMan:15.5.7.1 | MapMan:26.9.1.7 | Gene3D:3.30.730.10 | EMBL:AK374106 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| ncoils:Coil | InterPro:DNA-bd_dom_sf | UniProt:F2ED81 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:HORVU2Hr1G037540 | EnsemblPlants:HORVU2Hr1G037540.1 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF26 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI00020084AC | SEG:seg | : | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2ED81]
Coordinates
chrchr2H:+:172615642..172617203
Molecular Weight (calculated)
32385.9 Da
IEP (calculated)
7.817
GRAVY (calculated)
-0.463
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MELHFQVQPA VLQLQDYCYY YQHQQQEAAA VQAKPTKPRG RKKGSTSHSK FVGVRQRPSG RWVAEIKDTT QKIRMWLGTF ETADAAARAY DEAARLLRGA
101: EARTNFAPRI SPDCPLAVRI RGLLHHKKLK KARLPAASAN IPGPSSTPAA PATYAPSNSN SNSNSNSNSN SMDGGACGGA SSSSSSSAVS CDGAMKQGGG
201: EVYRPDFAPV AGAEELESWM FESSFGQFPA LDGFAAVDAC TLPAASPEET SASGMVEFER MKVERRISAS LYAMNGLQEY FDKVFEASAG DPLWDLSPLC
301: Q
101: EARTNFAPRI SPDCPLAVRI RGLLHHKKLK KARLPAASAN IPGPSSTPAA PATYAPSNSN SNSNSNSNSN SMDGGACGGA SSSSSSSAVS CDGAMKQGGG
201: EVYRPDFAPV AGAEELESWM FESSFGQFPA LDGFAAVDAC TLPAASPEET SASGMVEFER MKVERRISAS LYAMNGLQEY FDKVFEASAG DPLWDLSPLC
301: Q
001: MEHQTTPKQK TKEKSKGNKT KFVGVRQRPS GKWVAEIKDT TQKIRMWLGT FETAEEAARA YDEAACLLRG SNTRTNFANH FPNNSQLSLK IRNLLHQKQS
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
Arabidopsis Description
RAP2-11Ethylene-responsive transcription factor RAP2-11 [Source:UniProtKB/Swiss-Prot;Acc:Q6J9S1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.