Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G083500.1 | Wheat | nucleus, plastid | 84.17 | 84.38 |
| TraesCS5A01G071300.1 | Wheat | nucleus, plastid | 82.97 | 82.97 |
| TraesCS5B01G077300.1 | Wheat | nucleus | 80.82 | 81.01 |
| Os12t0582900-01 | Rice | nucleus | 47.24 | 49.62 |
| Zm00001d030862_P001 | Maize | plastid | 48.68 | 49.03 |
| OQU79442 | Sorghum | nucleus | 47.96 | 47.17 |
| HORVU4Hr1G013410.1 | Barley | nucleus | 37.89 | 41.47 |
| HORVU2Hr1G037540.1 | Barley | nucleus | 19.66 | 27.24 |
| HORVU6Hr1G090800.1 | Barley | nucleus | 18.7 | 24.3 |
Protein Annotations
| MapMan:15.5.7.1 | MapMan:26.9.1.7 | Gene3D:3.30.730.10 | UniProt:A0A287QIK4 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| ncoils:Coil | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU5Hr1G018720 | EnsemblPlants:HORVU5Hr1G018720.1 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 |
| PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF41 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000B470589 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:76820409..76821839
Molecular Weight (calculated)
44711.5 Da
IEP (calculated)
4.217
GRAVY (calculated)
-0.559
Length
417 amino acids
Sequence
(BLAST)
(BLAST)
001: TLQADRAGSM VPSMARKRKA SDDASDADID VGIPLSLAST DAWTTSTVAA ATAARQQQRG RKRFVGVRQR PSGRWVAEIK DTIQKIRVWL GTFDTAEEAA
101: RAYDEAACLL RGANTRTNFW PRPSPPAALQ PPPAMLSMQA PALPSKVSNL LLLRLKARNQ QLLRDDAAAP QEAALLQQHM SSSTSSCQES YVHGRERDDE
201: YCFQVDDFLS DECNNSPEME EEEEEVEEEE EEEEEMDFQF MDKSAAAGDE DAGLCSPFEM VAAELGGSAP VEANDADGEP ATAVQEAMRR MDYERKVSAS
301: LYALSGVSEC LRMRLGGGGA SAARDQLTGL REACRKKQRV AVQQPASEQS SEPAAAAGAD HDAEDGKASV QEECSGSSSS GLTEAGSSPS PEAANGGSDG
401: DVLLWSSLDL APICYMA
101: RAYDEAACLL RGANTRTNFW PRPSPPAALQ PPPAMLSMQA PALPSKVSNL LLLRLKARNQ QLLRDDAAAP QEAALLQQHM SSSTSSCQES YVHGRERDDE
201: YCFQVDDFLS DECNNSPEME EEEEEVEEEE EEEEEMDFQF MDKSAAAGDE DAGLCSPFEM VAAELGGSAP VEANDADGEP ATAVQEAMRR MDYERKVSAS
301: LYALSGVSEC LRMRLGGGGA SAARDQLTGL REACRKKQRV AVQQPASEQS SEPAAAAGAD HDAEDGKASV QEECSGSSSS GLTEAGSSPS PEAANGGSDG
401: DVLLWSSLDL APICYMA
001: MEHQTTPKQK TKEKSKGNKT KFVGVRQRPS GKWVAEIKDT TQKIRMWLGT FETAEEAARA YDEAACLLRG SNTRTNFANH FPNNSQLSLK IRNLLHQKQS
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
Arabidopsis Description
RAP2-11Ethylene-responsive transcription factor RAP2-11 [Source:UniProtKB/Swiss-Prot;Acc:Q6J9S1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.