Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G018720.1 | Barley | nucleus | 49.62 | 47.24 |
| TraesCS5D01G083500.1 | Wheat | nucleus, plastid | 49.12 | 46.88 |
| TraesCS5A01G071300.1 | Wheat | nucleus, plastid | 48.61 | 46.28 |
| TraesCS5B01G077300.1 | Wheat | nucleus | 48.36 | 46.15 |
| Zm00001d030862_P001 | Maize | plastid | 39.8 | 38.16 |
| OQU79442 | Sorghum | nucleus | 40.05 | 37.5 |
| Os07t0204000-00 | Rice | nucleus | 17.63 | 26.32 |
| Os07t0575000-00 | Rice | nucleus | 21.66 | 21.08 |
Protein Annotations
| MapMan:15.5.7.1 | MapMan:26.9.1.7 | Gene3D:3.30.730.10 | UniProt:A0A0P0YBP3 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| ProteinID:BAT17833.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR001471 | InterPro:IPR036955 | EnsemblPlantsGene:Os12g0582900 | EnsemblPlants:Os12t0582900-01 | PFAM:PF00847 | PRINTS:PR00367 |
| PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF1 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000393A627 |
| SEG:seg | : | : | : | : | : |
Description
ETHYLENE RESPONSE FACTOR 4Similar to AP2 domain containing protein, expressed. (Os12t0582900-01)
Coordinates
chr12:+:24202762..24204188
Molecular Weight (calculated)
41772.6 Da
IEP (calculated)
4.564
GRAVY (calculated)
-0.378
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: QPHSLTQAKL AIDRSSSMPP SMATARVASP STDRKRKASS EDDIDAAAAA AALTSPLAPA RGRKRFVGVR QRPSGRWVAE IKDTIQKIRV WLGTFDTAEE
101: AARAYDEAAC LLRGANTRTN FWPRPSPPPA AVAPPETTTT PALPSKVTNL LLLRLKARNQ QVVDAGAAAP QEAALLQLQQ QTPASCQEVF VRSHGEEYGF
201: HVDDFLSDAC SNEQYSGDSS LGLDDDDGEV EDEEEEELDF QFMDVAPGAS SAAAEAGLGG EGALCSPFEM VAAELGGAVD VAAHDAMRQM DYERKISASL
301: YALTGVSECL RIRAAAGATA AARDHLTGLR EACRKKQKFA AAAAAPPQQQ EPSPPPQQPE TPASSGGGMS ETASGGGGDG DVLMWSSLDL APICHMA
101: AARAYDEAAC LLRGANTRTN FWPRPSPPPA AVAPPETTTT PALPSKVTNL LLLRLKARNQ QVVDAGAAAP QEAALLQLQQ QTPASCQEVF VRSHGEEYGF
201: HVDDFLSDAC SNEQYSGDSS LGLDDDDGEV EDEEEEELDF QFMDVAPGAS SAAAEAGLGG EGALCSPFEM VAAELGGAVD VAAHDAMRQM DYERKISASL
301: YALTGVSECL RIRAAAGATA AARDHLTGLR EACRKKQKFA AAAAAPPQQQ EPSPPPQQPE TPASSGGGMS ETASGGGGDG DVLMWSSLDL APICHMA
001: MEHQTTPKQK TKEKSKGNKT KFVGVRQRPS GKWVAEIKDT TQKIRMWLGT FETAEEAARA YDEAACLLRG SNTRTNFANH FPNNSQLSLK IRNLLHQKQS
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
Arabidopsis Description
RAP2-11Ethylene-responsive transcription factor RAP2-11 [Source:UniProtKB/Swiss-Prot;Acc:Q6J9S1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.