Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d021892_P001 | Maize | nucleus | 74.6 | 75.32 |
| EER99585 | Sorghum | nucleus | 74.92 | 73.27 |
| HORVU2Hr1G037540.1 | Barley | nucleus | 58.52 | 60.47 |
| TraesCS2A01G185600.1 | Wheat | nucleus | 58.84 | 60.2 |
| TraesCS2D01G202100.1 | Wheat | nucleus | 57.56 | 58.5 |
| TraesCS2B01G221700.1 | Wheat | nucleus | 56.59 | 57.33 |
| Os07t0575000-00 | Rice | nucleus | 58.2 | 44.36 |
| Zm00001d019116_P001 | Maize | nucleus | 35.37 | 34.16 |
| Zm00001d021214_P001 | Maize | plastid | 18.01 | 25.69 |
| Zm00001d033353_P001 | Maize | nucleus | 26.69 | 19.86 |
| Zm00001d030862_P001 | Maize | plastid | 26.37 | 19.81 |
Protein Annotations
| EntrezGene:103647769 | MapMan:15.5.7.1 | MapMan:26.9.1.7 | Gene3D:3.30.730.10 | UniProt:A0A060D100 | ProteinID:AIB05152.1 |
| InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | ProteinID:ONM24662.1 | PFAM:PF00847 | PRINTS:PR00367 |
| PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF26 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000220F6C0 |
| EnsemblPlantsGene:Zm00001d006653 | EnsemblPlants:Zm00001d006653_P001 | EnsemblPlants:Zm00001d006653_T001 | SEG:seg | : | : |
Description
AP2-EREBP-transcription factor 62Ethylene-responsive transcription factor RAP2-11
Coordinates
chr2:-:213547650..213548585
Molecular Weight (calculated)
33508.1 Da
IEP (calculated)
8.124
GRAVY (calculated)
-0.386
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MELHFQPQPP VFQLEGYTSS SSYYYYYQQE AAAQAKPSKP RCRKKGSNNH SKFVGVRQRP SGRWVAEIKD TTQKIRMWLG TFETAEAAAK AYDEAARLLR
101: GSDARTNFAP RISPDCPLAV RIRGLLHHKK IKKAKASAAA AAAKQQASSP PAPSPTTSNS NSHSHSTNSA CGGGSSSSSS SSSSSVVSCD DAMAIQRGGI
201: GVLGASEVYR PEFATAGAEE FDSWMFDSAF AQFPALDSFV AVDSVVPVAG ATEEPIVAAT RGAEMAEFER IKVERRISAS LYAMNGLQEY FDRVLDASAC
301: DSLWDLSPLC H
101: GSDARTNFAP RISPDCPLAV RIRGLLHHKK IKKAKASAAA AAAKQQASSP PAPSPTTSNS NSHSHSTNSA CGGGSSSSSS SSSSSVVSCD DAMAIQRGGI
201: GVLGASEVYR PEFATAGAEE FDSWMFDSAF AQFPALDSFV AVDSVVPVAG ATEEPIVAAT RGAEMAEFER IKVERRISAS LYAMNGLQEY FDRVLDASAC
301: DSLWDLSPLC H
001: MEHQTTPKQK TKEKSKGNKT KFVGVRQRPS GKWVAEIKDT TQKIRMWLGT FETAEEAARA YDEAACLLRG SNTRTNFANH FPNNSQLSLK IRNLLHQKQS
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
Arabidopsis Description
RAP2-11Ethylene-responsive transcription factor RAP2-11 [Source:UniProtKB/Swiss-Prot;Acc:Q6J9S1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.