Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G312400.1 | Wheat | plastid | 96.46 | 96.89 |
| TraesCS5B01G313300.1 | Wheat | plastid | 95.58 | 95.58 |
| TraesCS1B01G281500.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 58.41 | 72.53 |
| Zm00001d021214_P001 | Maize | plastid | 46.9 | 48.62 |
| EER97067 | Sorghum | plastid | 48.23 | 44.86 |
| GSMUA_Achr3P12350_001 | Banana | mitochondrion | 24.78 | 43.41 |
| PGSC0003DMT400043930 | Potato | nucleus | 31.42 | 25.18 |
| KRH48263 | Soybean | plastid | 36.73 | 24.92 |
| KRH65161 | Soybean | plastid | 36.28 | 24.05 |
| Solyc01g091760.2.1 | Tomato | nucleus | 29.2 | 22.68 |
| TraesCS2D01G202100.1 | Wheat | nucleus | 21.24 | 15.69 |
| TraesCS6D01G377000.1 | Wheat | nucleus | 22.57 | 15.45 |
| TraesCS4D01G077500.1 | Wheat | nucleus | 23.45 | 12.93 |
| TraesCS5D01G083500.1 | Wheat | nucleus, plastid | 23.45 | 12.74 |
Protein Annotations
| MapMan:15.5.7.1 | MapMan:26.9.1.7 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 |
| InterPro:IPR036955 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF7 |
| SMART:SM00380 | SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS5D01G319200 | EnsemblPlants:TraesCS5D01G319200.1 | TIGR:cd00018 | SEG:seg |
Description
No Description!
Coordinates
chr5D:-:412147133..412147813
Molecular Weight (calculated)
23668.7 Da
IEP (calculated)
8.933
GRAVY (calculated)
-0.252
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAQESGRSA ASATATMTVC RGRRFLGVRQ RPSGRWVAEI KDSVQRVRLW LGTFDTAEDA ACAYDEAARA LRGENTRTNF AARHGAAARA RLSKNLQHVM
101: ARAAAGRSPS GRGAGVGDQF ALAAVFRDWQ QPALSPQLPL GCRAEAETVH VAASSVQPSF VVPRRTEAPP PSDTAGGAGD DAWAADVLEL DGGGETSAEK
201: AFKVSSSVIV PSKFGAAPEL FGLDGF
101: ARAAAGRSPS GRGAGVGDQF ALAAVFRDWQ QPALSPQLPL GCRAEAETVH VAASSVQPSF VVPRRTEAPP PSDTAGGAGD DAWAADVLEL DGGGETSAEK
201: AFKVSSSVIV PSKFGAAPEL FGLDGF
001: MEHQTTPKQK TKEKSKGNKT KFVGVRQRPS GKWVAEIKDT TQKIRMWLGT FETAEEAARA YDEAACLLRG SNTRTNFANH FPNNSQLSLK IRNLLHQKQS
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
101: MKQQQQQQHK PVSSLTDCNI NYISTATSLT TTTTTTTTTA IPLNNVYRPD SSVIGQPETE GLQLPYSWPL VSGFNHQIPL AQAGGETHGH LNDHYSTDQH
201: LGLAEIERQI SASLYAMNGA NSYYDNMNAE YAIFDPTDPI WDLPSLSQLF CPT
Arabidopsis Description
RAP2-11Ethylene-responsive transcription factor RAP2-11 [Source:UniProtKB/Swiss-Prot;Acc:Q6J9S1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.