Factsheet for Os08t0158300-00

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
vacuole 1
peroxisome 2
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0343600-00	Rice	cytosol, peroxisome	61.44	46.08
PGSC0003DMT400009569	Potato	cytosol	50.99	43.07
Os08t0158400-00	Rice	endoplasmic reticulum, extracellular, vacuole	51.24	36.65
KRG92465	Soybean	golgi, vacuole	49.75	36.36
KRH34335	Soybean	vacuole	49.75	36.36
GSMUA_Achr1P24050_001	Banana	golgi	42.79	36.29
Solyc04g080400.1.1	Tomato	extracellular	50.25	35.82
Os06t0548100-00	Rice	golgi	44.28	33.27
Os06t0549900-01	Rice	extracellular	42.54	32.39
Os06t0549633-00	Rice	vacuole	42.04	32.01
Os06t0548200-01	Rice	extracellular	42.04	31.65
Os06t0548800-01	Rice	extracellular	41.04	31.07
Os06t0549300-00	Rice	extracellular	39.55	30.4
Os06t0549600-01	Rice	extracellular	39.55	30.23
Os11t0495950-00	Rice	plasma membrane, vacuole	40.3	30.0
Os02t0235900-01	Rice	plasma membrane, vacuole	40.3	28.57
VIT_18s0089g01200.t01	Wine grape	plasma membrane	51.74	18.01
Os08t0158200-02	Rice	extracellular	3.73	2.84

Protein Annotations

Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	ProteinID:BAC65011.1	ProteinID:BAT03912.1	InterPro:BBE
InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660	GO:GO:0055114
GO:GO:0071949	InterPro:IPR016166	EnsemblPlantsGene:Os08g0158300	EnsemblPlants:Os08t0158300-00	InterPro:Oxid_FAD_bind_N	PFAM:PF01565
PFAM:PF08031	PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF52	UniProt:Q84PV6	SUPFAM:SSF56176
UniParc:UPI000000460C	SEG:seg	:	:	:	:

Description

Hypothetical conserved gene. (Os08t0158300-00)

Coordinates

chr8:-:3412330..3413538

Molecular Weight (calculated)

44465.8 Da

IEP (calculated)

8.963

GRAVY (calculated)

-0.160

Length

402 amino acids

Sequence
(BLAST)

001: MNLNRVHVDS VSGTAWVKSG ATLGELYYAI GQLNRSLAFS AGSCSTVGMG GFVSGGGFGL ISRKFALAAD NVLDAILMDP NGNALNRGSM GDDVFWAIRG
101: GGGGSWGVVY AWKLQLVHVP HSITVFSLNR TGPLEQTAKL MHKWQFVGPH LPDEFYLSIH ILTGTSNGNV SMSFTGQVIG PKQYAMLVLH HTFPELGIVE
201: SDLSEMSWIE STAKFARLNS TADLTNRRLG IKYYSKSKSD YVHSPISMQD TIKIIEYLSN GPQGFIQLNP YGGAMARIGS SELPFPYRAG YLYSIEYNVS
301: WKASDNDRAD EFIRWLRSFY AYMAPHVSKN PLAAYVNYLD LDLGTNTWRN ATDGTSNNSV IHAKSWGIRY FSKNFDRLVR AKTMIDPENV FNNAQSIPPL
401: QY

Best Arabidopsis Sequence Match ( AT5G44380.1 )
(BLAST)

001: MGNSKPLPTI SCIIVSVLYF SFYCITPTSS SASIQDQFIN CVKRNTHVSF PLEKTLFTPA KNVSLFNQVL ESTAQNLQFL AKSMPKPGFI FRPIHQSQVQ
101: ASIICSKKLG IHFRVRSGGH DFEALSYVSR IEKPFILLDL SKLKQINVDI ESNSAWVQPG ATLGELYYRI AEKSKIHGFP AGLCTSVGIG GYMTGGGYGT
201: LMRKYGLAGD NVLDVKMVDA NGKLLDRAAM GEDLFWAIRG GGGASFGIVL AWKIKLVPVP KTVTVFTVTK TLEQDARLKT ISKWQQISSK IIEEIHIRVV
301: LRAAGNDGNK TVTMTYLGQF LGEKGTLLKV MEKAFPELGL TQKDCTEMSW IEAALFHGGF PTGSPIEILL QLKSPLGKDY FKATSDFVKE PIPVIGLKGI
401: FKRLIEGNTT FLNWTPYGGM MSKIPESAIP FPHRNGTLFK ILYYANWLEN DKTSSRKINW IKEIYNYMAP YVSSNPRQAY VNYRDLDFGQ NKNNAKVNFI
501: EAKIWGPKYF KGNFDRLVKI KTKVDPENFF RHEQSIPPMP Y

Arabidopsis Description

FAD-binding Berberine family protein [Source:TAIR;Acc:AT5G44380]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.