Subcellular Localization
min:
: max
Winner_takes_all: cytosol, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- peroxisome 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d022215_P001 | Maize | plastid | 61.19 | 62.24 |
| Os08t0158300-00 | Rice | peroxisome | 46.08 | 61.44 |
| GSMUA_Achr1P24050_001 | Banana | golgi | 45.52 | 51.48 |
| Os08t0158400-00 | Rice | endoplasmic reticulum, extracellular, vacuole | 52.24 | 49.82 |
| PGSC0003DMT400009569 | Potato | cytosol | 42.91 | 48.32 |
| KRG92465 | Soybean | golgi, vacuole | 46.64 | 45.45 |
| KRH34335 | Soybean | vacuole | 46.64 | 45.45 |
| Os06t0548100-00 | Rice | golgi | 44.03 | 44.11 |
| Solyc04g080400.1.1 | Tomato | extracellular | 46.27 | 43.97 |
| Os06t0549900-01 | Rice | extracellular | 42.54 | 43.18 |
| Os06t0548200-01 | Rice | extracellular | 41.79 | 41.95 |
| Os06t0549300-00 | Rice | extracellular | 40.11 | 41.11 |
| Os06t0549600-01 | Rice | extracellular | 39.55 | 40.3 |
| Os06t0548800-01 | Rice | extracellular | 39.74 | 40.11 |
| Os11t0495950-00 | Rice | plasma membrane, vacuole | 39.55 | 39.26 |
| Os06t0549633-00 | Rice | vacuole | 38.06 | 38.64 |
| Os02t0235900-01 | Rice | plasma membrane, vacuole | 40.49 | 38.27 |
| VIT_18s0089g01200.t01 | Wine grape | plasma membrane | 50.19 | 23.29 |
| Os08t0158200-02 | Rice | extracellular | 2.61 | 2.65 |
Protein Annotations
| Gene3D:3.30.43.10 | Gene3D:3.30.465.50 | Gene3D:3.40.462.20 | MapMan:50.1.1 | UniProt:A0A0P0XEY6 | ProteinID:BAT05020.1 |
| InterPro:BBE | InterPro:FAD-bd_2 | InterPro:FAD-bd_2-like_sf | InterPro:FAD-bd_2_sub1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0016614 |
| GO:GO:0050660 | GO:GO:0055114 | GO:GO:0071949 | InterPro:IPR016166 | InterPro:IPR016167 | EnsemblPlantsGene:Os08g0343600 |
| EnsemblPlants:Os08t0343600-00 | InterPro:Oxid_FAD_bind_N | PFAM:PF01565 | PFAM:PF08031 | PFscan:PS51387 | PANTHER:PTHR32448 |
| PANTHER:PTHR32448:SF52 | SUPFAM:SSF56176 | UniParc:UPI00039393DC | SEG:seg | : | : |
Description
Hypothetical conserved gene. (Os08t0343600-00)
Coordinates
chr8:-:15510426..15512119
Molecular Weight (calculated)
56152.2 Da
IEP (calculated)
8.619
GRAVY (calculated)
0.009
Length
536 amino acids
Sequence
(BLAST)
(BLAST)
001: QACAAGQHCD DRAAAGSLPS CLLATGVRNF SLAGSPAYDA LLNFSIQNLR FALPAAGAVP RPAAVVLPRG RSELTSAVLC ARHASLRIRV RSGAHSYEGL
101: SYTVGDGGDD ADRVRFVVID LTRMNRVRVD AASATAWVES GATLGEIYYA VASSSSSLAF PAGSCSTVGA GGHISGGGFG LLSRKFKLAA DNVLDAILVD
201: ADGRVLDRSS MGENVFWAIR GGGGGGWGVV YAWKLRLVQV PNTLTAFTPK RTGSVDAIAG LVHRWQYVGS ALPDEFYLSV FLTIGGASSS SPSRDGNVTV
301: SFTGLVLGSK ELAMSVLSER FPELGLAEPE MSEMSWVESA ARFAGLSSTE ELTSRASRTK HYAKSKSDYV RSPIARGAVA AILRYLAGEP AGYVILDPYG
401: GAMAREGSGD TPFPHRAGNL YSVQYGVTWE AGDDGGGGGG GGEARMAWLR ALYAYMAPHV SKNPRAAYVN YVDLDLGTNA LAGNVSSPSS SVSRARSTWG
501: SAYFSPANFE RLVGAKTLID RSNVFSNAQS IPPLQI
101: SYTVGDGGDD ADRVRFVVID LTRMNRVRVD AASATAWVES GATLGEIYYA VASSSSSLAF PAGSCSTVGA GGHISGGGFG LLSRKFKLAA DNVLDAILVD
201: ADGRVLDRSS MGENVFWAIR GGGGGGWGVV YAWKLRLVQV PNTLTAFTPK RTGSVDAIAG LVHRWQYVGS ALPDEFYLSV FLTIGGASSS SPSRDGNVTV
301: SFTGLVLGSK ELAMSVLSER FPELGLAEPE MSEMSWVESA ARFAGLSSTE ELTSRASRTK HYAKSKSDYV RSPIARGAVA AILRYLAGEP AGYVILDPYG
401: GAMAREGSGD TPFPHRAGNL YSVQYGVTWE AGDDGGGGGG GGEARMAWLR ALYAYMAPHV SKNPRAAYVN YVDLDLGTNA LAGNVSSPSS SVSRARSTWG
501: SAYFSPANFE RLVGAKTLID RSNVFSNAQS IPPLQI
001: MAFVLMNNTN AFLVTLLLLS LSYIPLSFST IQQDFVMCLV DNSDASFPMD SSFFTHDLNA SSFKLALETS AQNLRYLMPS NPKPEFIFEP LYETHVQAAV
101: LCAKKLKLHL RLRSGGHDYE GLSYVSEMET AFVIVDLSKL RQISVDIESN SAWVHAGASI GEVYYRIQEK SKIHGFPAGL CTSLGIGGHI IGGAYGSMMR
201: KFGLGADNVL DARIVDADGK ILNRAAMGED VFWAIRGGGG GSFGVILAWK IKLVPVPEIV TVFTVTRTLE QDGTKLLYKW QQVADKLDED LFIRVIIQPT
301: SKTPKSKERT ISTSYQGQFL GDANRLLQVM QRSFPQLGLT KKDCLETSWI KSVMYIAGFP STAPSEALLD GKSLFKNYFK AKSDYVEEPI PVEGLEGLWE
401: KLLEEDSPLT IWNPYGGMMA KIPETETPFP HRSGTLFKIQ WLTLWQDGKT SEAKHMGWMR EMYSYMEQYV SKSPRSAYVN YRDLDLGMNG KGSDAREWGN
501: RYFKGNFERL VEIKAKFDPE NFFRHEQSIP TELE
101: LCAKKLKLHL RLRSGGHDYE GLSYVSEMET AFVIVDLSKL RQISVDIESN SAWVHAGASI GEVYYRIQEK SKIHGFPAGL CTSLGIGGHI IGGAYGSMMR
201: KFGLGADNVL DARIVDADGK ILNRAAMGED VFWAIRGGGG GSFGVILAWK IKLVPVPEIV TVFTVTRTLE QDGTKLLYKW QQVADKLDED LFIRVIIQPT
301: SKTPKSKERT ISTSYQGQFL GDANRLLQVM QRSFPQLGLT KKDCLETSWI KSVMYIAGFP STAPSEALLD GKSLFKNYFK AKSDYVEEPI PVEGLEGLWE
401: KLLEEDSPLT IWNPYGGMMA KIPETETPFP HRSGTLFKIQ WLTLWQDGKT SEAKHMGWMR EMYSYMEQYV SKSPRSAYVN YRDLDLGMNG KGSDAREWGN
501: RYFKGNFERL VEIKAKFDPE NFFRHEQSIP TELE
Arabidopsis Description
FAD-binding Berberine family protein [Source:TAIR;Acc:AT1G30760]
SUBAcon: [plasma membrane,endoplasmic reticulum]
SUBAcon: [plasma membrane,endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.