Factsheet for GSMUA_Achr1P24050_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 6
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	52.32	48.92
HORVU3Hr1G083890.1	Barley	cytosol, peroxisome	35.44	47.73
TraesCS3A01G374600.1	Wheat	vacuole	53.38	47.38
TraesCS3D01G367200.1	Wheat	vacuole	52.53	46.54
TraesCS3D01G367100.1	Wheat	vacuole	52.11	46.34
TraesCS3A01G374700.1	Wheat	vacuole	52.11	46.17
TraesCS3B01G406900.1	Wheat	vacuole	51.9	46.15
Zm00001d049539_P001	Maize	extracellular, vacuole	52.95	45.8
KXG24484	Sorghum	plastid	52.53	45.6
Os08t0343600-00	Rice	cytosol, peroxisome	51.48	45.52
EES14581	Sorghum	extracellular	53.59	45.44
Zm00001d049536_P001	Maize	vacuole	52.11	45.4
HORVU3Hr1G083840.1	Barley	mitochondrion, plastid	51.69	44.71
PGSC0003DMT400009569	Potato	cytosol	43.88	43.7
Os08t0158300-00	Rice	peroxisome	36.29	42.79
HORVU3Hr1G083860.2	Barley	mitochondrion, plastid	29.75	42.47
KRG92465	Soybean	golgi, vacuole	49.16	42.36
GSMUA_Achr2P15490_001	Banana	golgi, vacuole	37.13	42.0
KRH34335	Soybean	vacuole	48.1	41.45
OQU79940	Sorghum	endoplasmic reticulum	48.52	41.37
Zm00001d022215_P001	Maize	plastid	44.3	39.85
Solyc04g080400.1.1	Tomato	extracellular	47.05	39.54
GSMUA_Achr3P23450_001	Banana	plasma membrane, vacuole	36.92	39.06
GSMUA_Achr3P23470_001	Banana	extracellular, plasma membrane, vacuole	30.8	35.18
GSMUA_Achr4P31040_001	Banana	vacuole	38.82	34.46
GSMUA_Achr3P23440_001	Banana	extracellular, plasma membrane	32.28	29.77
VIT_18s0089g01200.t01	Wine grape	plasma membrane	51.05	20.95
Os08t0158200-02	Rice	extracellular	3.16	2.84

Protein Annotations

Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	InterPro:BBE	InterPro:FAD-bd_2
InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660	GO:GO:0055114
GO:GO:0071949	EnsemblPlantsGene:GSMUA_Achr1G24050_001	EnsemblPlants:GSMUA_Achr1P24050_001	EnsemblPlants:GSMUA_Achr1T24050_001	InterPro:IPR016166	InterPro:IPR016167
UniProt:M0S2L2	InterPro:Oxid_FAD_bind_N	InterPro:Oxy_OxRdtase_FAD_BS	PFAM:PF01565	PFAM:PF08031	ScanProsite:PS00862
PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF13	SUPFAM:SSF56176	TMHMM:TMhelix	UniParc:UPI0002948538
SEG:seg	:	:	:	:	:

Description

Putative Reticuline oxidase [Source:GMGC_GENE;Acc:GSMUA_Achr1G24050_001]

Coordinates

chr1:+:18480857..18482732

Molecular Weight (calculated)

52000.1 Da

IEP (calculated)

9.610

GRAVY (calculated)

-0.124

Length

474 amino acids

Sequence
(BLAST)

001: MRRRRSLLSI NSLLSSLSLI LTTTMERNHR VLFLGVSLFS CFFTIIHSEV NTTTAGGIIT STSILTSCLR SSGVRNFTVS SSPPSAAYSL LLNSSIRNLR
101: FAGPDTPKPS AIILPCTKED LRNAVLCLRK ASLAIRVRSG GHSYEGLSYT SDPYVPFAVV DLMNLNKVRV DPDSLTAWAE SGATISGGGF GLLSRKYGLA
201: ADNVLDAVLI DSSGRVLNRE SMGEDVFWAI RGGGGGSWGA IYAWKLRLVP VPERVTACTP TRSGPTLSVA ELVHKWQYVA PSLPDELYLS VYIAGSRGRA
301: FFKAKSDYVR APIGKNGLIT ALDWLSKKEE AYVILDPYGG EMGRVRSDRI AFPHRGGNLY GIQYMVDWSA EETGEGYVAW LRGFYEYMGR YVSKKPRAAY
401: VNYVDLDLGT VDWSGGGPRN AVGEARVWGE RYFLGNYDRL VKAKTQIDPH NVFNNAQSIP PLPTTQNSKN EVNS

Best Arabidopsis Sequence Match ( AT5G44410.1 )
(BLAST)

001: MEILRFLLSL FIYFLLLNLS LSHFPSISAQ RTNHENFLKC LSHRINEDDS RIIHTSKDPS YFSILNSSIQ NPRFFVLETP KPVSIITPVQ ATDVQSTIKC
101: ARLHGIHIRT RSGGHDYEGL SYMAKSRPFV VIDLRNLRSI TLDVDNRTGW VQSGATIGEL YYEIGKLSKS LAFPAGLYPT VGIGGQFGGG GYGTLMRKYG
201: LSADNVIDAH IVDANGSFLD RQGMGEDFFW AIRGGGGSSF SVVLSWKIRL LDVPSVVTVF KVVKTSEKEA VSIINKWQYI ADKVPNDLFI RAMLQKETEV
301: YASFPGLYLG PVSDLLALMK DKFPELGLEI GNCREMSWIE SVLWFIKGES MEILAKRKRT SRSFKGKDDF IEEPIPKTAI QYLWRRFEAP EARLAKIILT
401: PFGGKMSEIA DNEIPFPHRE GNLYEIQYLA YWSEEEDKNK TNTEKYLRWV ESVYEFMTPY VSKSPRRAYV NFRDIDLGMY LGLNMKTKYE EAKVWGVKYF
501: KNNFDRLVRV KTNVDPMDFF CDEQSIPIMK YVNDI

Arabidopsis Description

Berberine bridge enzyme-like 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI25]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.