Factsheet for HORVU3Hr1G083840.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 3
peroxisome 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G083890.1	Barley	cytosol, peroxisome	61.68	96.02
TraesCS3A01G374700.1	Wheat	vacuole	87.41	89.53
TraesCS3B01G406900.1	Wheat	vacuole	86.31	88.74
TraesCS3D01G367200.1	Wheat	vacuole	86.13	88.22
TraesCS3A01G374600.1	Wheat	vacuole	85.4	87.64
TraesCS3D01G367100.1	Wheat	vacuole	84.67	87.05
HORVU3Hr1G083860.2	Barley	mitochondrion, plastid	49.27	81.33
KXG24484	Sorghum	plastid	65.88	66.12
Zm00001d049536_P001	Maize	vacuole	65.33	65.81
OQU79940	Sorghum	endoplasmic reticulum	58.76	57.91
GSMUA_Achr1P24050_001	Banana	golgi	44.71	51.69
PGSC0003DMT400009569	Potato	cytosol	41.24	47.48
HORVU1Hr1G091500.1	Barley	extracellular, vacuole	48.36	46.57
KRG92465	Soybean	golgi, vacuole	45.07	44.91
KRH34335	Soybean	vacuole	44.89	44.73
HORVU1Hr1G092680.1	Barley	golgi, vacuole	41.97	42.91
Solyc04g080400.1.1	Tomato	extracellular	44.16	42.91
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	41.06	41.82
HORVU2Hr1G008270.1	Barley	peroxisome	23.54	41.48
HORVU7Hr1G089270.1	Barley	vacuole	39.42	40.6
HORVU2Hr1G008300.1	Barley	plastid	38.5	40.11
HORVU7Hr1G089160.3	Barley	vacuole	38.14	39.81
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	38.32	39.62
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	35.95	38.1
HORVU2Hr1G122590.1	Barley	vacuole	36.86	37.76
HORVU2Hr1G008310.1	Barley	golgi, vacuole	37.23	37.57
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	36.13	37.36
HORVU7Hr1G093940.1	Barley	vacuole	35.95	37.17
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	39.05	36.96
HORVU7Hr1G089190.1	Barley	vacuole	35.4	36.95
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	29.2	36.53
HORVU2Hr1G000540.1	Barley	golgi, vacuole	36.13	36.46
HORVU4Hr1G017270.1	Barley	vacuole	35.95	36.28
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	38.32	36.14
HORVU2Hr1G013930.1	Barley	golgi, vacuole	35.4	35.53
HORVU7Hr1G089210.1	Barley	mitochondrion	36.5	32.57
HORVU7Hr1G026630.1	Barley	plastid	28.83	31.16
HORVU7Hr1G089260.1	Barley	mitochondrion	26.09	29.42
VIT_18s0089g01200.t01	Wine grape	plasma membrane	47.08	22.34

Protein Annotations

Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	UniProt:A0A287M085	InterPro:BBE
InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660
GO:GO:0055114	GO:GO:0071949	EnsemblPlantsGene:HORVU3Hr1G083840	EnsemblPlants:HORVU3Hr1G083840.1	InterPro:IPR016166	InterPro:IPR016167
InterPro:Oxid_FAD_bind_N	InterPro:Oxy_OxRdtase_FAD_BS	PFAM:PF01565	PFAM:PF08031	ScanProsite:PS00862	PFscan:PS51387
PANTHER:PTHR32448	PANTHER:PTHR32448:SF52	SUPFAM:SSF56176	SignalP:SignalP-noTM	UniParc:UPI000B46342E	SEG:seg

Description

No Description!

Coordinates

chrchr3H:+:605327520..605329514

Molecular Weight (calculated)

59713.4 Da

IEP (calculated)

8.278

GRAVY (calculated)

-0.175

Length

548 amino acids

Sequence
(BLAST)

001: MLISTSISRY HRTAMHSVAA SLQLLCLLLS LHRLPCSGAA AATASNFSSC LVSNGVTNFS LPTSPDYTGL LNSSIFNLRF TLPNVPGPAA VVLPESRDEL
101: RRAILCARTS SLAIRLRSGG HSYEGLSYTT ENHVPFVVAD LANLNRVRVE PSSATAWAES GSTVGKLYYA VGRSNRSLAF TAGSESTTGL GGHISGGGFG
201: LLSRKFGLAA DNVLDAALIT PDGRVHDRSS MGDDVFWAIR GGGGGSWGVV YAWKLRLVPV PRNVTVFTVD RTGPVELIAG LVHRWQYVGP NLPDEFYLSV
301: YAPTGSTEGN VSISFTGQVL ESKEHALSVF SQSFPELGLT EEDLSEMSWI ESTAKFAGLS TVDDLANRRR QPKQYSKSKS DYAQEPISRN DMVEIFRYLS
401: TGPRGSIQLD PYGGAMARIG RAETPFPHRA GNLYSIQYGV NWDRSEVARA EEYIGWLRSF YKYMTPFVSK DPRAAYVNYL DLDLGVNNWT RAAGGSSQEA
501: VARARSSWGH AYFGENFDRL IRAKMVVDPG NVFNNAQSIP PLNIRAEE

Best Arabidopsis Sequence Match ( AT4G20820.1 )
(BLAST)

001: MKFQSFFSSV LIFFTTSTLL LSIPHPVSAN RSNQSSFLQC LSLQLNDSNI VSKVIHTPND TSFSSVLASS IQNQRFSAPD VPKPVLILTP VQPSDVQSAV
101: KCARRFGIHI RTRSGGHDYE GLSYVTHKPF VILDLRNLRS ITVDVDNRSV WVQTGATIGE LYYEIGKKNR TLAFPAGVCP TVGVGGHFSG GGYGTLLRKH
201: GLAADHVIDA RVVDARGRIL ERREMGEDFF WAIRGGGGSS FCVVLSWKIG LINVPSTVTV FNVTKFSEQS ALKIIHRWQF VADKVSDDLF IRVMLQRYKN
301: MVRASFPGLY LGSVKNLLKM VNKEFPELGL EEDDCTEMSW IESVIWFAEL GEEPINVLTK RTRASLAFKA KSDFVQEPMP KTAISKLWRR LQEPEAEHAQ
401: LIFTPFGGKM SEIADYETPF PHRKGNIYEI QYLNYWRGDV KEKYMRWVER VYDDMSEFVA KSPRGAYINL RDLDLGMYVG VKRSKYEEGK SWGVKYFKNN
501: FERLVRVKTS VDPSDFFCDE QSIPPFTFVE VI

Arabidopsis Description

Berberine bridge enzyme-like 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9SVG5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.