Factsheet for TraesCS3A01G374700.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G367200.1	Wheat	vacuole	93.27	93.27
HORVU3Hr1G083890.1	Barley	cytosol, peroxisome	59.81	90.91
TraesCS3A01G374600.1	Wheat	vacuole	90.65	90.82
HORVU3Hr1G083840.1	Barley	mitochondrion, plastid	89.53	87.41
HORVU3Hr1G083860.2	Barley	mitochondrion, plastid	48.41	78.01
KXG24484	Sorghum	plastid	67.29	65.93
Zm00001d049536_P001	Maize	vacuole	66.73	65.62
OQU79940	Sorghum	endoplasmic reticulum	60.75	58.45
GSMUA_Achr1P24050_001	Banana	golgi	46.17	52.11
TraesCS1A01G418900.1	Wheat	extracellular, vacuole	49.53	47.24
PGSC0003DMT400009569	Potato	cytosol	41.87	47.06
KRG92465	Soybean	golgi, vacuole	46.54	45.27
KRH34335	Soybean	vacuole	46.36	45.09
TraesCS7A01G354100.1	Wheat	vacuole	34.95	42.99
Solyc04g080400.1.1	Tomato	extracellular	45.05	42.73
TraesCS1A01G433900.1	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.8	42.64
TraesCS1A01G424100.1	Wheat	vacuole	40.56	42.55
TraesCS7A01G126600.1	Wheat	vacuole	41.31	42.5
TraesCS7A01G353700.1	Wheat	extracellular, vacuole	41.68	41.92
TraesCS5A01G261400.1	Wheat	vacuole	40.93	41.71
TraesCS7A01G354000.1	Wheat	vacuole	40.19	41.59
TraesCS7A01G353600.1	Wheat	cytosol, nucleus, peroxisome	17.01	41.55
TraesCS2A01G052700.1	Wheat	extracellular, plasma membrane, plastid, vacuole	40.0	40.92
TraesCS7A01G353900.1	Wheat	vacuole	39.44	40.66
TraesCS2A01G052800.1	Wheat	plastid, vacuole	39.63	40.38
TraesCS2A01G051500.1	Wheat	peroxisome	25.61	40.18
TraesCS2A01G052900.1	Wheat	unclear	39.44	39.96
TraesCS2A01G052600.1	Wheat	vacuole	39.25	39.47
TraesCS5A01G555000.1	Wheat	plasma membrane, vacuole	37.94	39.34
TraesCS2A01G123200.1	Wheat	plasma membrane, vacuole	41.5	38.74
TraesCS7A01G400100.1	Wheat	unclear	37.94	38.67
TraesCS3A01G111600.1	Wheat	vacuole	38.13	38.42
TraesCS7A01G353800.1	Wheat	vacuole	37.2	38.27
TraesCS2A01G542600.1	Wheat	vacuole	37.57	37.85
TraesCS7A01G484600.1	Wheat	extracellular, plasma membrane, vacuole	36.82	37.74
TraesCS4A01G081300.1	Wheat	unclear	39.44	37.35
TraesCS2A01G123400.1	Wheat	plasma membrane, vacuole	40.37	37.18
TraesCS2A01G005700.1	Wheat	vacuole	34.39	37.17
TraesCS4A01G212100.1	Wheat	vacuole	37.2	36.72
VIT_18s0089g01200.t01	Wine grape	plasma membrane	48.6	22.51

Protein Annotations

Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	InterPro:BBE	InterPro:FAD-bd_2
InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660	GO:GO:0055114
InterPro:IPR016166	InterPro:IPR016167	InterPro:Oxid_FAD_bind_N	InterPro:Oxy_OxRdtase_FAD_BS	PFAM:PF01565	PFAM:PF08031
ScanProsite:PS00862	PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF52	SUPFAM:SSF56176	SignalP:SignalP-noTM
EnsemblPlantsGene:TraesCS3A01G374700	EnsemblPlants:TraesCS3A01G374700.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3A:-:624184661..624186268

Molecular Weight (calculated)

57492.8 Da

IEP (calculated)

7.234

GRAVY (calculated)

-0.083

Length

535 amino acids

Sequence
(BLAST)

001: MHSVAALLQL FCLLLSLHQS PCSGAAATPG NFSACLVSNG VTNFSLPTSP SYAGLLNSSI FNLRFNLPSV PGPAAVVLPE SRDELRRAIL CARASSLAIR
101: VRSGGHSYEG LSYTTENHVP FVVIDLANLN RVRVEPGSAT AWAESGATVG ELYYAVGQSS QSLAFPAGSE STTGLGGQVS GGGFGLLSRK FALAADNVLD
201: AALITPDGRV LDRSSMGDDV FWTIRGGGGG SWGVVYAWKL RLVPVPRNVT AFTVGRTGPV ELIAGLLHRW QYVGPNLPDE FYLSVYAPTG STDGNVSISF
301: TGQVLESKER ALSVISQSFP ELGLTEVDLS EMSWVESTAK FAGLNTVEDL ANRRRQPKQY SKSKSDYVQA PISRHDMVEI FRHLSTGPTG SIQLDPYGGA
401: MARVGSAETP FPHRAGNLYS IQYGVNWDRS EVARAEEFIG WLRSFYKFMA PLVSKDPRAA YVNYLDLDLG VNNWTRAAGG SSAQAVSRAR SSWGEAYFGE
501: NFDRLVRAKT VVDPGNVFNN AQSIPPLNIR AEGQT

Best Arabidopsis Sequence Match ( AT1G30700.1 )
(BLAST)

001: MKYALILVLF FVVFIWQSSS SSANSETFTQ CLTSNSDPKH PISPAIFFSG NGSYSSVLQA NIRNLRFNTT STPKPFLIIA ATHESHVQAA ITCGKRHNLQ
101: MKIRSGGHDY DGLSYVTYSG KPFFVLDMFN LRSVDVDVAS KTAWVQTGAI LGEVYYYIWE KSKTLAYPAG ICPTVGVGGH ISGGGYGNMM RKYGLTVDNT
201: IDARMVDVNG KILDRKLMGE DLYWAINGGG GGSYGVVLAY KINLVEVPEN VTVFRISRTL EQNATDIIHR WQQVAPKLPD ELFIRTVIDV VNGTVSSQKT
301: VRTTFIAMFL GDTTTLLSIL NRRFPELGLV RSDCTETSWI QSVLFWTNIQ VGSSETLLLQ RNQPVNYLKR KSDYVREPIS RTGLESIWKK MIELEIPTMA
401: FNPYGGEMGR ISSTVTPFPY RAGNLWKIQY GANWRDETLT DRYMELTRKL YQFMTPFVSK NPRQSFFNYR DVDLGINSHN GKISSYVEGK RYGKKYFAGN
501: FERLVKIKTR VDSGNFFRNE QSIPVLP

Arabidopsis Description

Berberine bridge enzyme-like 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA85]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.