Factsheet for TraesCS3D01G367200.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G374700.1	Wheat	vacuole	93.27	93.27
TraesCS3D01G367100.1	Wheat	vacuole	90.28	90.62
HORVU3Hr1G083890.1	Barley	cytosol, peroxisome	58.13	88.35
HORVU3Hr1G083840.1	Barley	mitochondrion, plastid	88.22	86.13
HORVU3Hr1G083860.2	Barley	mitochondrion, plastid	49.16	79.22
KXG24484	Sorghum	plastid	67.1	65.75
Zm00001d049536_P001	Maize	vacuole	66.36	65.26
OQU79940	Sorghum	endoplasmic reticulum	61.31	58.99
GSMUA_Achr1P24050_001	Banana	golgi	46.54	52.53
TraesCS1D01G426600.1	Wheat	extracellular, vacuole	49.72	47.5
PGSC0003DMT400009569	Potato	cytosol	41.87	47.06
KRG92465	Soybean	golgi, vacuole	46.54	45.27
KRH34335	Soybean	vacuole	46.36	45.09
TraesCS1D01G443200.1	Wheat	cytosol	26.36	44.62
TraesCS7D01G369200.1	Wheat	extracellular, vacuole	42.99	43.48
TraesCS7D01G368500.1	Wheat	plasma membrane, vacuole	42.06	43.44
TraesCS1D01G433600.1	Wheat	vacuole	43.74	43.33
TraesCS2D01G151500.1	Wheat	vacuole	42.43	42.91
TraesCS7D01G124500.1	Wheat	plasma membrane, vacuole	41.68	42.88
TraesCS1D01G338700.1	Wheat	plasma membrane	42.8	42.72
TraesCS5D01G268800.1	Wheat	vacuole	41.87	42.67
Solyc04g080400.1.1	Tomato	extracellular	44.86	42.55
TraesCS7D01G368700.1	Wheat	unclear	40.0	41.39
TraesCS7D01G368800.1	Wheat	vacuole	39.81	40.96
TraesCS2D01G052500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	39.44	39.96
TraesCS5D01G309100.1	Wheat	vacuole	38.88	39.92
TraesCS7D01G369100.1	Wheat	plasma membrane, vacuole	42.06	39.82
TraesCS2D01G126200.1	Wheat	plasma membrane, vacuole	42.43	39.48
TraesCS7D01G393900.1	Wheat	vacuole	38.5	39.39
TraesCS2D01G052300.1	Wheat	plastid	38.69	39.28
TraesCS2D01G006000.1	Wheat	plastid	37.01	39.13
TraesCS2D01G052700.1	Wheat	unclear	38.5	39.02
TraesCS3D01G113700.1	Wheat	extracellular, plasma membrane, vacuole	37.94	38.52
TraesCS7D01G472000.1	Wheat	vacuole	36.82	37.74
TraesCS2D01G126400.1	Wheat	golgi, vacuole	40.56	37.48
TraesCS7D01G369000.1	Wheat	extracellular, vacuole	36.26	37.31
TraesCS4D01G223000.1	Wheat	plasma membrane	39.44	37.28
TraesCS4D01G101000.1	Wheat	golgi	36.82	36.28
TraesCS2D01G052400.1	Wheat	vacuole	26.92	35.82
TraesCS7D01G368900.1	Wheat	cytosol, peroxisome, plasma membrane	15.7	35.15
TraesCS2D01G543700.1	Wheat	unclear	36.82	35.12
VIT_18s0089g01200.t01	Wine grape	plasma membrane	48.78	22.6

Protein Annotations

Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	InterPro:BBE	ncoils:Coil
InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660
GO:GO:0055114	InterPro:IPR016166	InterPro:IPR016167	InterPro:Oxid_FAD_bind_N	InterPro:Oxy_OxRdtase_FAD_BS	PFAM:PF01565
PFAM:PF08031	ScanProsite:PS00862	PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF52	SUPFAM:SSF56176
SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS3D01G367200	EnsemblPlants:TraesCS3D01G367200.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr3D:-:481391880..481393487

Molecular Weight (calculated)

57867.2 Da

IEP (calculated)

7.623

GRAVY (calculated)

-0.127

Length

535 amino acids

Sequence
(BLAST)

001: MHSVAALLQL LCLLFSLHQS PCYGAVATPG NFSSCLVSNG VKNFSLPTSP SYAGLLNSSI FNLRFTLPSV AGPAAVVLPE SRDELRRAIL CARPSSLAIR
101: VRSGGHSYEG LSYTTENHVP FVVVDLANLN RVRVEPGSAT AWAESGATVG ELYYAVGQSS QSLAFTAGSE STTGLGGHVS GGGFGLLSRK FALAADNVLD
201: ATLITPDGRV LDRSSMGDDV FWAIRGGGGG SWGVVYAWKL RLVPVPRNVT AFTVGRTGPV ELIAGLLHRW QYVGPNLPDE FYLSVYAPTG STDGNVSISF
301: TGQVLESKER ALSVLSQSFP ELGLTEQDLS EMSWVESTAK FAGLSTVEDL ANRRRQPKQY SKSKSDYVQA PISRHDMAEI VRYLSTGPTG SIQLDPYGGA
401: MARVGSSETP FPHRARNLYS IQYGVIWDRS QVARAEEFIG WLRSFYKFMA PYVSKDPRAA YVNYQDLDLG VNNWTRAAGW SSAEAVARAR TSWGKAYFGE
501: NFDRLVRAKT EADPGNVFNN AQSIPPLNIG AEEHT

Best Arabidopsis Sequence Match ( AT1G30760.2 )
(BLAST)

001: MKLLNKHKNL TTTKQHTKMA FVLMNNTNAF LVTLLLLSLS YIPLSFSTIQ QDFVMCLVDN SDASFPMDSS FFTHDLNASS FKLALETSAQ NLRYLMPSNP
101: KPEFIFEPLY ETHVQAAVLC AKKLKLHLRL RSGGHDYEGL SYVSEMETAF VIVDLSKLRQ ISVDIESNSA WVHAGASIGE VYYRIQEKSK IHGFPAGLCT
201: SLGIGGHIIG GAYGSMMRKF GLGADNVLDA RIVDADGKIL NRAAMGEDVF WAIRGGGGGS FGVILAWKIK LVPVPEIVTV FTVTRTLEQD GTKLLYKWQQ
301: VADKLDEDLF IRVIIQPTSK TPKSKERTIS TSYQGQFLGD ANRLLQVMQR SFPQLGLTKK DCLETSWIKS VMYIAGFPST APSEALLDGK SLFKNYFKAK
401: SDYVEEPIPV EGLEGLWEKL LEEDSPLTIW NPYGGMMAKI PETETPFPHR SGTLFKIQWL TLWQDGKTSE AKHMGWMREM YSYMEQYVSK SPRSAYVNYR
501: DLDLGMNGKG SDAREWGNRY FKGNFERLVE IKAKFDPENF FRHEQSIPTE LE

Arabidopsis Description

FAD-binding Berberine family protein [Source:TAIR;Acc:AT1G30760]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.