Factsheet for HORVU3Hr1G083860.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G083840.1	Barley	mitochondrion, plastid	81.33	49.27
TraesCS3D01G367200.1	Wheat	vacuole	79.22	49.16
TraesCS3B01G406900.1	Wheat	vacuole	78.31	48.78
TraesCS3A01G374700.1	Wheat	vacuole	78.01	48.41
TraesCS3A01G374600.1	Wheat	vacuole	77.11	47.94
TraesCS3D01G367100.1	Wheat	vacuole	76.81	47.84
HORVU3Hr1G083890.1	Barley	cytosol, peroxisome	46.69	44.03
KXG24484	Sorghum	plastid	63.86	38.83
Zm00001d049536_P001	Maize	vacuole	62.05	37.87
OQU79940	Sorghum	endoplasmic reticulum	59.04	35.25
GSMUA_Achr1P24050_001	Banana	golgi	42.47	29.75
HORVU2Hr1G000530.1	Barley	plasma membrane, vacuole	38.55	29.22
PGSC0003DMT400009569	Potato	cytosol	41.27	28.78
HORVU1Hr1G091500.1	Barley	extracellular, vacuole	49.1	28.65
KRG92465	Soybean	golgi, vacuole	44.58	26.91
KRH34335	Soybean	vacuole	43.98	26.55
HORVU1Hr1G092680.1	Barley	golgi, vacuole	41.27	25.56
HORVU7Hr1G089160.3	Barley	vacuole	39.76	25.14
HORVU4Hr1G086520.1	Barley	plasma membrane, vacuole	38.55	24.76
HORVU7Hr1G089280.1	Barley	mitochondrion, peroxisome, plasma membrane	40.06	24.72
HORVU2Hr1G008300.1	Barley	plastid	39.16	24.71
HORVU2Hr1G008310.1	Barley	golgi, vacuole	40.36	24.68
Solyc04g080400.1.1	Tomato	extracellular	41.57	24.47
HORVU3Hr1G020240.1	Barley	extracellular, plasma membrane, vacuole	38.86	24.34
HORVU7Hr1G089270.1	Barley	vacuole	38.86	24.25
HORVU2Hr1G008330.1	Barley	extracellular, plasma membrane, vacuole	37.95	23.77
HORVU2Hr1G122590.1	Barley	vacuole	37.95	23.55
HORVU7Hr1G089260.1	Barley	mitochondrion	34.04	23.25
HORVU2Hr1G000540.1	Barley	golgi, vacuole	37.95	23.2
HORVU7Hr1G093940.1	Barley	vacuole	36.14	22.64
HORVU2Hr1G008270.1	Barley	peroxisome	21.08	22.51
HORVU2Hr1G021650.2	Barley	golgi, mitochondrion, plastid, vacuole	38.86	22.28
HORVU4Hr1G062830.1	Barley	mitochondrion, peroxisome, plasma membrane	38.55	22.03
HORVU2Hr1G013930.1	Barley	golgi, vacuole	36.14	21.98
HORVU4Hr1G017270.1	Barley	vacuole	35.54	21.73
HORVU7Hr1G089190.1	Barley	vacuole	34.04	21.52
HORVU7Hr1G026630.1	Barley	plastid	29.52	19.33
HORVU7Hr1G089210.1	Barley	mitochondrion	34.94	18.89
VIT_18s0089g01200.t01	Wine grape	plasma membrane	44.88	12.9

Protein Annotations

Gene3D:3.30.43.10	Gene3D:3.30.465.10	Gene3D:3.40.462.20	MapMan:50.1.1	UniProt:A0A287M068	InterPro:FAD-bd_2
InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660	GO:GO:0055114
GO:GO:0071949	EnsemblPlantsGene:HORVU3Hr1G083860	EnsemblPlants:HORVU3Hr1G083860.2	InterPro:IPR016166	InterPro:IPR016167	InterPro:Oxid_FAD_bind_N
InterPro:Oxy_OxRdtase_FAD_BS	PFAM:PF01565	ScanProsite:PS00862	PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF52
SUPFAM:SSF56176	UniParc:UPI000B485261	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:605358437..605359663

Molecular Weight (calculated)

35791.4 Da

IEP (calculated)

9.645

GRAVY (calculated)

-0.163

Length

332 amino acids

Sequence
(BLAST)

001: MRRRSRRAIS RPASSPTASP TSPCPRLRAT PGCSTPPSST SGSRSRTYVA RPAAVVFPES RDEVRRAILC ARTSSLAIRV RSGGHSYEGL SYTTENHVPF
101: VVADLANLNR VRVEPGSATA WAESGATVGE LYYAVGRSNR TLAFTAGSES TTGLGGHVSG GGFGLLSRKF ALAADNVLDA ALITPDGRVH DRSSMGDDVF
201: WAIRGGGGGS WGVVYAWKLW LVPVPRNVTV FTVDRTGPVQ LIAGLVHRWQ YVGPNLPDEY YLSVYAPTGS MEGNVSISFT GQVLESKEYA LSVLSQSFPE
301: LGLTEQDLSE MSWIEWTAKL LGLVPHQLWK KT

Best Arabidopsis Sequence Match ( AT1G30760.2 )
(BLAST)

001: MKLLNKHKNL TTTKQHTKMA FVLMNNTNAF LVTLLLLSLS YIPLSFSTIQ QDFVMCLVDN SDASFPMDSS FFTHDLNASS FKLALETSAQ NLRYLMPSNP
101: KPEFIFEPLY ETHVQAAVLC AKKLKLHLRL RSGGHDYEGL SYVSEMETAF VIVDLSKLRQ ISVDIESNSA WVHAGASIGE VYYRIQEKSK IHGFPAGLCT
201: SLGIGGHIIG GAYGSMMRKF GLGADNVLDA RIVDADGKIL NRAAMGEDVF WAIRGGGGGS FGVILAWKIK LVPVPEIVTV FTVTRTLEQD GTKLLYKWQQ
301: VADKLDEDLF IRVIIQPTSK TPKSKERTIS TSYQGQFLGD ANRLLQVMQR SFPQLGLTKK DCLETSWIKS VMYIAGFPST APSEALLDGK SLFKNYFKAK
401: SDYVEEPIPV EGLEGLWEKL LEEDSPLTIW NPYGGMMAKI PETETPFPHR SGTLFKIQWL TLWQDGKTSE AKHMGWMREM YSYMEQYVSK SPRSAYVNYR
501: DLDLGMNGKG SDAREWGNRY FKGNFERLVE IKAKFDPENF FRHEQSIPTE LE

Arabidopsis Description

FAD-binding Berberine family protein [Source:TAIR;Acc:AT1G30760]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.