CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 4
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 5
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049536_P001	Maize	vacuole	82.23	82.54
HORVU3Hr1G083890.1	Barley	cytosol, peroxisome	45.24	70.17
TraesCS3D01G367100.1	Wheat	vacuole	66.12	67.73
TraesCS3B01G406900.1	Wheat	vacuole	65.75	67.35
TraesCS3A01G374700.1	Wheat	vacuole	65.93	67.29
TraesCS3A01G374600.1	Wheat	vacuole	65.75	67.23
TraesCS3D01G367200.1	Wheat	vacuole	65.75	67.1
OQU79940	Sorghum	endoplasmic reticulum	67.77	66.55
HORVU3Hr1G083840.1	Barley	mitochondrion, plastid	66.12	65.88
EES14581	Sorghum	extracellular	65.38	63.86
HORVU3Hr1G083860.2	Barley	mitochondrion, plastid	38.83	63.86
GSMUA_Achr1P24050_001	Banana	golgi	45.6	52.53
KXG24485	Sorghum	extracellular	50.18	47.57
PGSC0003DMT400009569	Potato	cytosol	41.03	47.06
KRG92465	Soybean	golgi, vacuole	46.34	46.0
KRH34335	Soybean	vacuole	45.6	45.27
EER89910	Sorghum	vacuole	41.58	42.91
KXG20146	Sorghum	extracellular	41.76	42.78
Solyc04g080400.1.1	Tomato	extracellular	44.14	42.73
KXG20949	Sorghum	vacuole	41.76	42.14
EER89909	Sorghum	extracellular, plasma membrane, vacuole	40.11	41.63
EES13185	Sorghum	vacuole	41.03	41.03
KXG20147	Sorghum	vacuole	40.11	40.86
KXG26140	Sorghum	plasma membrane	39.19	40.0
EER89907	Sorghum	plasma membrane, vacuole	38.1	39.54
EER89908	Sorghum	plasma membrane, vacuole	38.28	38.78
KXG29886	Sorghum	mitochondrion	39.56	37.18
KXG28418	Sorghum	vacuole	35.35	36.55
KXG29885	Sorghum	plastid	30.77	33.53
VIT_18s0089g01200.t01	Wine grape	plasma membrane	46.15	21.82

Protein Annotations

Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	UniProt:A0A1B6PFM5	InterPro:BBE
InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660
GO:GO:0055114	GO:GO:0071949	InterPro:IPR016166	InterPro:IPR016167	EnsemblPlants:KXG24484	ProteinID:KXG24484
ProteinID:KXG24484.1	InterPro:Oxid_FAD_bind_N	InterPro:Oxy_OxRdtase_FAD_BS	PFAM:PF01565	PFAM:PF08031	ScanProsite:PS00862
PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF52	EnsemblPlantsGene:SORBI_3007G048400	SUPFAM:SSF56176	SignalP:SignalP-noTM
UniParc:UPI0003C6B60E	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:4817244..4818884

Molecular Weight (calculated)

58036.9 Da

IEP (calculated)

8.410

GRAVY (calculated)

0.033

Length

546 amino acids

Sequence
(BLAST)

001: MTTMNTMVAA AALALHLFAV SATRASTTQS SSPPPQPPAS AVDISSCLLS NGVANFSLPS SPSYTPLLNS SIRNLRFALP SVGKPAAVVL PATKRDIQHA
101: VLCARSTSLA IRVRSGGHSY EGLSYTTENH VPFMVIDLAN LNHVDVDPVS ATAWVESGAT LGEVYHAVGL SNRTLAFSAG SCATVGMGGH AAGGGFGLLS
201: RKFGLSADNV LDAVLIDASG DALTRATMPD DVFWAIRGGG GGSWGVVYAW KVRLVPVPDN ITVFTVRRTG PAELIAGLMH RWQYVAPSLP DEFYLSAYIP
301: TGPSSNGNHS ISFTGQVLRP KRLAMSVLCQ TFPELGLAES ELSEVSWLES AVKFAGLSTV ANLTSRQPGV GQYSKSKSDY VQAPISKQDA VKILRFMATA
401: GSPAPEGAIQ LDPYGGAMAR IGSTMTPFPH RAGYLYSIQY SVSWKASDVD CADEYVGWLR SFYDFMAPYV TKNPRAAYVN YLDLDLGTNG WMNATGGTSY
501: GSVGHAASSW GQRYFLANFG RLVRAKTKVD PENVFNNAQS IPPLYS

Best Arabidopsis Sequence Match ( AT1G30760.1 )
(BLAST)

001: MAFVLMNNTN AFLVTLLLLS LSYIPLSFST IQQDFVMCLV DNSDASFPMD SSFFTHDLNA SSFKLALETS AQNLRYLMPS NPKPEFIFEP LYETHVQAAV
101: LCAKKLKLHL RLRSGGHDYE GLSYVSEMET AFVIVDLSKL RQISVDIESN SAWVHAGASI GEVYYRIQEK SKIHGFPAGL CTSLGIGGHI IGGAYGSMMR
201: KFGLGADNVL DARIVDADGK ILNRAAMGED VFWAIRGGGG GSFGVILAWK IKLVPVPEIV TVFTVTRTLE QDGTKLLYKW QQVADKLDED LFIRVIIQPT
301: SKTPKSKERT ISTSYQGQFL GDANRLLQVM QRSFPQLGLT KKDCLETSWI KSVMYIAGFP STAPSEALLD GKSLFKNYFK AKSDYVEEPI PVEGLEGLWE
401: KLLEEDSPLT IWNPYGGMMA KIPETETPFP HRSGTLFKIQ WLTLWQDGKT SEAKHMGWMR EMYSYMEQYV SKSPRSAYVN YRDLDLGMNG KGSDAREWGN
501: RYFKGNFERL VEIKAKFDPE NFFRHEQSIP TELE

Arabidopsis Description

FAD-binding Berberine family protein [Source:TAIR;Acc:AT1G30760]
SUBAcon: [plasma membrane,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.