CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
golgi 5
plasma membrane 5
endoplasmic reticulum 5
vacuole 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049539_P001	Maize	extracellular, vacuole	87.48	89.23
KXG24484	Sorghum	plastid	63.86	65.38
OQU79940	Sorghum	endoplasmic reticulum	59.57	59.89
GSMUA_Achr1P24050_001	Banana	golgi	45.44	53.59
KXG24485	Sorghum	extracellular	50.63	49.13
KRH34335	Soybean	vacuole	48.3	49.09
KRG92465	Soybean	golgi, vacuole	48.12	48.91
PGSC0003DMT400009569	Potato	cytosol	40.97	48.11
EER89909	Sorghum	extracellular, plasma membrane, vacuole	41.86	44.49
KXG20146	Sorghum	extracellular	42.22	44.28
Solyc04g080400.1.1	Tomato	extracellular	44.36	43.97
KXG26140	Sorghum	plasma membrane	42.04	43.93
EER89910	Sorghum	vacuole	41.5	43.86
KXG20147	Sorghum	vacuole	40.61	42.35
EER89907	Sorghum	plasma membrane, vacuole	39.36	41.83
EES13185	Sorghum	vacuole	40.43	41.39
KXG20949	Sorghum	vacuole	39.53	40.85
EER89908	Sorghum	plasma membrane, vacuole	38.28	39.7
KXG28418	Sorghum	vacuole	37.03	39.2
KXG29886	Sorghum	mitochondrion	39.89	38.38
KXG29885	Sorghum	plastid	31.13	34.73
VIT_18s0089g01200.t01	Wine grape	plasma membrane	48.12	23.29

Protein Annotations

Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	EntrezGene:8069627	InterPro:BBE
UniProt:C5YHB1	EnsemblPlants:EES14581	ProteinID:EES14581	ProteinID:EES14581.1	InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf
InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660	GO:GO:0055114	GO:GO:0071949
InterPro:IPR016166	InterPro:IPR016167	InterPro:Oxid_FAD_bind_N	InterPro:Oxy_OxRdtase_FAD_BS	PFAM:PF01565	PFAM:PF08031
ScanProsite:PS00862	PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF52	EnsemblPlantsGene:SORBI_3007G048200	SUPFAM:SSF56176
SignalP:SignalP-noTM	UniParc:UPI0001A87BEC	RefSeq:XP_002445086.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr7:-:4806831..4809237

Molecular Weight (calculated)

58822.4 Da

IEP (calculated)

8.430

GRAVY (calculated)

0.010

Length

559 amino acids

Sequence
(BLAST)

001: MSCSIAALLV LVSLFLPLHQ STSSCYAAGA DDGAAAHSLS SCLLSHGVNN FTLRTSPSYA AILNSSISNL RFALPDVGKP AAVVLPASKR DLQRAVVCAR
101: ESSLAIRVRS GGHSYEGLSY TTENHVPFVV IDVANLNRVR VDRGSATAWA ESGATLGELY YAVGRSSRSL AFSAGSCSTI GLGGIVSGGG FGLLSRKFGL
201: AADNVLDAVL VDADGRVLDR TTMGADVFWA IRGGGGGSWG VVYAWKLRLV PVPRNVTVFS VGRTGPVDLV AGLIHRWQFV APSLPDDFYL SVYLPTGGLR
301: SSSSSSDGNV SVSFSGQVLG PKHRALSALR QSFPELGLTE SELAETSWLE ATAQFAGLDT AADLPNRLLG RSKQYSKGKS DYVRSPISRR AMAGIVRYLS
401: TGPPRQGQGQ GQGGGYVILD PYGGAMARIG SGDTPCPHRA GTLYGVQYQV YWDEDDGDLG GRAAAAGEFC VGWLRSLYAF MAPHVSKDPR AAYVNYLDLD
501: LGADNWTAPA GGSSEAAVAR ARSSWGAAYF GDNFDRLVRA KTLADPGNVF NNAQSIPPL

Best Arabidopsis Sequence Match ( AT1G30760.1 )
(BLAST)

001: MAFVLMNNTN AFLVTLLLLS LSYIPLSFST IQQDFVMCLV DNSDASFPMD SSFFTHDLNA SSFKLALETS AQNLRYLMPS NPKPEFIFEP LYETHVQAAV
101: LCAKKLKLHL RLRSGGHDYE GLSYVSEMET AFVIVDLSKL RQISVDIESN SAWVHAGASI GEVYYRIQEK SKIHGFPAGL CTSLGIGGHI IGGAYGSMMR
201: KFGLGADNVL DARIVDADGK ILNRAAMGED VFWAIRGGGG GSFGVILAWK IKLVPVPEIV TVFTVTRTLE QDGTKLLYKW QQVADKLDED LFIRVIIQPT
301: SKTPKSKERT ISTSYQGQFL GDANRLLQVM QRSFPQLGLT KKDCLETSWI KSVMYIAGFP STAPSEALLD GKSLFKNYFK AKSDYVEEPI PVEGLEGLWE
401: KLLEEDSPLT IWNPYGGMMA KIPETETPFP HRSGTLFKIQ WLTLWQDGKT SEAKHMGWMR EMYSYMEQYV SKSPRSAYVN YRDLDLGMNG KGSDAREWGN
501: RYFKGNFERL VEIKAKFDPE NFFRHEQSIP TELE

Arabidopsis Description

FAD-binding Berberine family protein [Source:TAIR;Acc:AT1G30760]
SUBAcon: [plasma membrane,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.