CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
plastid 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24484	Sorghum	plastid	66.55	67.77
TraesCS3D01G367200.1	Wheat	vacuole	58.99	61.31
TraesCS3D01G367100.1	Wheat	vacuole	58.45	60.98
TraesCS3A01G374700.1	Wheat	vacuole	58.45	60.75
TraesCS3B01G406900.1	Wheat	vacuole	57.91	60.41
TraesCS3A01G374600.1	Wheat	vacuole	57.73	60.11
EES14581	Sorghum	extracellular	59.89	59.57
HORVU3Hr1G083860.2	Barley	mitochondrion, plastid	35.25	59.04
HORVU3Hr1G083890.1	Barley	cytosol, peroxisome	37.23	58.81
HORVU3Hr1G083840.1	Barley	mitochondrion, plastid	57.91	58.76
GSMUA_Achr1P24050_001	Banana	golgi	41.37	48.52
PGSC0003DMT400009569	Potato	cytosol	39.21	45.8
KXG24485	Sorghum	extracellular	45.32	43.75
KRG92465	Soybean	golgi, vacuole	42.45	42.91
EER89910	Sorghum	vacuole	40.65	42.72
KXG20146	Sorghum	extracellular	39.75	41.46
KRH34335	Soybean	vacuole	41.01	41.45
Solyc04g080400.1.1	Tomato	extracellular	41.55	40.96
EER89909	Sorghum	extracellular, plasma membrane, vacuole	38.49	40.68
KXG20147	Sorghum	vacuole	38.49	39.93
EES13185	Sorghum	vacuole	39.03	39.74
KXG26140	Sorghum	plasma membrane	38.13	39.63
EER89907	Sorghum	plasma membrane, vacuole	37.23	39.35
KXG20949	Sorghum	vacuole	37.95	39.0
EER89908	Sorghum	plasma membrane, vacuole	35.61	36.73
KXG28418	Sorghum	vacuole	34.17	35.98
KXG29886	Sorghum	mitochondrion	36.51	34.94
KXG29885	Sorghum	plastid	28.96	32.14
VIT_18s0089g01200.t01	Wine grape	plasma membrane	42.63	20.52

Protein Annotations

Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	UniProt:A0A1Z5R877	InterPro:BBE
InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660
GO:GO:0055114	GO:GO:0071949	InterPro:IPR016166	InterPro:IPR016167	EnsemblPlants:OQU79940	ProteinID:OQU79940
ProteinID:OQU79940.1	InterPro:Oxid_FAD_bind_N	InterPro:Oxy_OxRdtase_FAD_BS	PFAM:PF01565	PFAM:PF08031	ScanProsite:PS00862
PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF52	EnsemblPlantsGene:SORBI_3007G048300	SUPFAM:SSF56176	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000B8BAFEF	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:4811033..4812703

Molecular Weight (calculated)

59059.8 Da

IEP (calculated)

7.376

GRAVY (calculated)

-0.031

Length

556 amino acids

Sequence
(BLAST)

001: MIHTMVAAAA LALNLFAAAA AGGAGAGAGA GSPPPHAHDI SSCLTSNSNV VTNFSLPSSP SFTPLLSSSI RYLRFVNNPS VGKPAAVVFP ASKEELQRAV
101: ICARNTSLAI RVRSGGHSYE GLSYTTENNV PFVVIDLANL NRVHVDGGSA TAWAESGATL GELYYAVGRS NRTLAFPGGT CSTVGLGGII SGGGFGLLSR
201: KFGLAADNVL DATLIDRNGN TLTRATMDGD VFWAIRGGGG GSFGVVYSWT LRLVPVPDKI TVFSGERIGP ADLIAPLIHK WQFVGPHLPD EFYISTRIYF
301: PGIIPGNNNL NMTFTGQFLA PKQQVMSVLN ETYPELGLAV SELSEVSWVE SAAKFAELKS VAELTDRQNG VGEYAKRKSD YAQAPISKQD MAEVARYMAR
401: APTTGSVQLN PYGGAMARIG SSETPFPHRA GYLYSIQYAI DWTAADDNAA GGRGGEFMAW LRAFYAFMAP HVSSNPRGAY VNYVDLDLGT DNWTEPTTGA
501: IGASSSYNAM VGVGQKAAAS WGQRYFLHNF DRLVRAKSKI DPENVFNHAQ SIPPSL

Best Arabidopsis Sequence Match ( AT2G34790.1 )
(BLAST)

001: MAFAISKRNA TLFLVTLLLI SVPLSSSTLQ QDFVKCLVDN SDVSFPITAS FFSPDQNATL FKEELESTAQ NLRYLTPSNP KPVFIFEPLY ETHVQAAVVC
101: AKKLQLHLRL RSGGHDYEGL SFVAEDETPF VIVDLSKLRQ VDVDLDSNSA WAHAGATIGE VYYRIQEKSQ THGFPAGLCS SLGIGGHLVG GAYGSMMRKF
201: GLGADNVLDA RIVDANGQIL DRAAMGEDVF WAIRGGGGGS FGVILAWKIK LVPVPATVTV FTVTKTLEQD GTKVLYKWEQ IADKLDDDLF IRVIISPASK
301: TTKPGNRTIS MSYQAQFLGD SNRLLQVMQK SFPELGLTKK DCTEMSWIKS VMYIAGFPNS AAPEALLAGK SLFKNHFKAK SDFVKEPIPV EGLEGLWERF
401: LEEDSPLTIW NPYGGMMSRI SESEIPFPHR NGTLFKIQWL STWQDGKVSE ERHMKWIREM YSYMEQYVSK NPRQAYVNYR DLDLGTNEGE TDAREWGAKY
501: YKGNFERLVK IKGEFDPDNF FRHEQSVPTK IG

Arabidopsis Description

MEE23Berberine bridge enzyme-like 15 [Source:UniProtKB/Swiss-Prot;Acc:O64743]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.