CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
golgi 5
plasma membrane 5
endoplasmic reticulum 5
vacuole 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024541_P001	Maize	vacuole	80.38	82.97
Os08t0158400-00	Rice	endoplasmic reticulum, extracellular, vacuole	74.65	76.51
TraesCS1A01G418900.1	Wheat	extracellular, vacuole	72.57	74.51
TraesCS1D01G426600.1	Wheat	extracellular, vacuole	71.35	73.39
HORVU1Hr1G091500.1	Barley	extracellular, vacuole	72.22	73.11
TraesCS1B01G448900.1	Wheat	endoplasmic reticulum, extracellular, vacuole	71.7	72.97
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	49.13	55.82
PGSC0003DMT400009569	Potato	cytosol	43.23	52.31
KRG92465	Soybean	golgi, vacuole	49.48	51.82
KRH34335	Soybean	vacuole	49.13	51.45
EES14581	Sorghum	extracellular	49.13	50.63
KXG24484	Sorghum	plastid	47.57	50.18
Solyc04g080400.1.1	Tomato	extracellular	45.83	46.81
OQU79940	Sorghum	endoplasmic reticulum	43.75	45.32
KXG20146	Sorghum	extracellular	40.1	43.34
EER89909	Sorghum	extracellular, plasma membrane, vacuole	38.72	42.4
KXG20147	Sorghum	vacuole	39.06	41.98
EER89910	Sorghum	vacuole	38.37	41.78
KXG26140	Sorghum	plasma membrane	38.37	41.31
EER89907	Sorghum	plasma membrane, vacuole	36.11	39.54
EES13185	Sorghum	vacuole	36.11	38.1
KXG28418	Sorghum	vacuole	34.9	38.07
KXG20949	Sorghum	vacuole	35.59	37.89
KXG29886	Sorghum	mitochondrion	38.19	37.87
EER89908	Sorghum	plasma membrane, vacuole	35.24	37.66
KXG29885	Sorghum	plastid	29.69	34.13
VIT_18s0089g01200.t01	Wine grape	plasma membrane	49.13	24.5

Protein Annotations

Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	UniProt:A0A1B6PFX6	InterPro:BBE
InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016614	GO:GO:0050660
GO:GO:0055114	GO:GO:0071949	InterPro:IPR016166	InterPro:IPR016167	EnsemblPlants:KXG24485	ProteinID:KXG24485
ProteinID:KXG24485.1	InterPro:Oxid_FAD_bind_N	InterPro:Oxy_OxRdtase_FAD_BS	PFAM:PF01565	PFAM:PF08031	ScanProsite:PS00862
PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF13	EnsemblPlantsGene:SORBI_3007G048600	SUPFAM:SSF56176	SignalP:SignalP-noTM
UniParc:UPI00081AC9BA	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:4829857..4831587

Molecular Weight (calculated)

62044.8 Da

IEP (calculated)

7.997

GRAVY (calculated)

-0.050

Length

576 amino acids

Sequence
(BLAST)

001: MAAFAMLSLV LLRLFAVQAA GVGVVDDGRS FTACLAAAGV GNVTTRESPA YAAALLVSVQ NLRFAGAGAP KPFAVVVPAS LQELRDSVRC ARAAGLVLRL
101: RSGGHSYEGL SYTTDDDDRT AFAVVDLAAL DRVDADRRTG TAWVQSGATL GQTYHAVAAA ASGSGPAAAL AFSAGSCPTV GSGGHIAGGG FGLLSRKFGL
201: AADNVVDAVL VDAAGRVLDR AAMGEDVFWA IRGGGGGTWG AVYAWRVRLS AVPDRVTAFV VNRAPGSVRS VASLVSTWQH VAPWLPDEFY ISAFVGAGLP
301: ELKKKKLNRT GISVTFKGLY LGPAHEALEI LTARFPEIGL SDLDPKEMSW IESVVFFSGL PEGSTVSDLT DRVLHQKNYF KAKSDYVRRP MTLEQLIRAI
401: DLLSKQPKAY VILDPYGGAM DRVGSADLPF PHRKGNIHGI QYLIEWAASD DDHKEEYMDW LRRFYDFMGA YVPKKPRTAY INYMDLDLGT NNWSGHRTDN
501: DIDKSPHPEV EAARAWGERY FLGNYDRLVR AKTLIDPENV FRNAQSIPPL GGVQCMIRST RGISPKITSN GSTYDS

Best Arabidopsis Sequence Match ( AT1G30760.1 )
(BLAST)

001: MAFVLMNNTN AFLVTLLLLS LSYIPLSFST IQQDFVMCLV DNSDASFPMD SSFFTHDLNA SSFKLALETS AQNLRYLMPS NPKPEFIFEP LYETHVQAAV
101: LCAKKLKLHL RLRSGGHDYE GLSYVSEMET AFVIVDLSKL RQISVDIESN SAWVHAGASI GEVYYRIQEK SKIHGFPAGL CTSLGIGGHI IGGAYGSMMR
201: KFGLGADNVL DARIVDADGK ILNRAAMGED VFWAIRGGGG GSFGVILAWK IKLVPVPEIV TVFTVTRTLE QDGTKLLYKW QQVADKLDED LFIRVIIQPT
301: SKTPKSKERT ISTSYQGQFL GDANRLLQVM QRSFPQLGLT KKDCLETSWI KSVMYIAGFP STAPSEALLD GKSLFKNYFK AKSDYVEEPI PVEGLEGLWE
401: KLLEEDSPLT IWNPYGGMMA KIPETETPFP HRSGTLFKIQ WLTLWQDGKT SEAKHMGWMR EMYSYMEQYV SKSPRSAYVN YRDLDLGMNG KGSDAREWGN
501: RYFKGNFERL VEIKAKFDPE NFFRHEQSIP TELE

Arabidopsis Description

FAD-binding Berberine family protein [Source:TAIR;Acc:AT1G30760]
SUBAcon: [plasma membrane,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.