Factsheet for Os08t0158400-00

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24485	Sorghum	extracellular	76.51	74.65
Zm00001d024541_P001	Maize	vacuole	73.49	74.01
TraesCS1A01G418900.1	Wheat	extracellular, vacuole	72.24	72.37
TraesCS1D01G426600.1	Wheat	extracellular, vacuole	71.53	71.79
TraesCS1B01G448900.1	Wheat	endoplasmic reticulum, extracellular, vacuole	71.53	71.02
HORVU1Hr1G091500.1	Barley	extracellular, vacuole	71.35	70.47
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	51.42	57.0
Os08t0343600-00	Rice	cytosol, peroxisome	49.82	52.24
KRG92465	Soybean	golgi, vacuole	50.53	51.64
KRH34335	Soybean	vacuole	50.36	51.45
PGSC0003DMT400009569	Potato	cytosol	43.42	51.26
Os08t0158300-00	Rice	peroxisome	36.65	51.24
Solyc04g080400.1.1	Tomato	extracellular	46.98	46.81
Os06t0548100-00	Rice	golgi	40.57	42.62
Os06t0548200-01	Rice	extracellular	38.97	41.01
Os06t0549900-01	Rice	extracellular	37.54	39.96
Os06t0549300-00	Rice	extracellular	36.65	39.39
Os06t0549633-00	Rice	vacuole	36.48	38.83
Os06t0549600-01	Rice	extracellular	36.12	38.59
Os02t0235900-01	Rice	plasma membrane, vacuole	38.79	38.45
Os06t0548800-01	Rice	extracellular	35.77	37.85
Os11t0495950-00	Rice	plasma membrane, vacuole	34.52	35.93
VIT_18s0089g01200.t01	Wine grape	plasma membrane	51.25	24.94
Os08t0158200-02	Rice	extracellular	2.49	2.65

Protein Annotations

EntrezGene:107275898	Gene3D:3.30.43.10	Gene3D:3.30.465.50	Gene3D:3.40.462.20	MapMan:50.1.1	ProteinID:BAC65012.1
ProteinID:BAT03913.1	InterPro:BBE	InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	InterPro:FAD-bd_2_sub1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0016614	GO:GO:0050660	GO:GO:0055114	GO:GO:0071949	InterPro:IPR016166	InterPro:IPR016167
EnsemblPlantsGene:Os08g0158400	EnsemblPlants:Os08t0158400-00	InterPro:Oxid_FAD_bind_N	InterPro:Oxy_OxRdtase_FAD_BS	PFAM:PF01565	PFAM:PF08031
ScanProsite:PS00862	PFscan:PS51387	PANTHER:PTHR32448	PANTHER:PTHR32448:SF13	UniProt:Q84PV5	SUPFAM:SSF56176
SignalP:SignalP-noTM	UniParc:UPI000000460D	RefSeq:XP_015649184.1	SEG:seg	:	:

Description

Similar to Berberine bridge enzyme-like protein. (Os08t0158400-00)

Coordinates

chr8:-:3415483..3417216

Molecular Weight (calculated)

60571.2 Da

IEP (calculated)

6.338

GRAVY (calculated)

-0.064

Length

562 amino acids

Sequence
(BLAST)

001: MAMAIATAAL LSLLAVLRAG GDVDDGGGAI MEPCLAAAGV RNVTARRERD AYDAALRASA QNLRFAGDGV AKPAAVVVPA TRGELRDAVR CAREAGLGAV
101: RLRSGGHSYE GVSYTGEDDG GFVVVDLLAL DGVRVDAASR TAWVESGATL GQVYQAVAAA SPALAFSAGS CPTVGSGGHI AGGGFGFLSR KYGLAGDNVI
201: DAVLIAADGR VLDRAGMGED VFWAIRGGGG GTWGAVYAWR IQLVPVPERV TAFVVNRPGT AESVAELVAA WQHVAPWLPD EFYLSAFVGA GLPEMNRTGI
301: SVTFKGLYLG PAHEAVEILT ARLPEIGLSD LNPIEMSWIE SVVFFSGLPQ GSSVSDLTDR VLHKKKYFKA KSDYVRRPMR IGELIRAIDL LSTEPKAYVI
401: LDPYGGAMDR IGSASLPFPH RRGNIHGIQY LIEWTANDDD HREEYMDWIR RFYEFMGSYV PNSPRTAYIN YMDLDLGMNN WSNLRMYGGD GIPNPEVEAA
501: RVWGERYFLG NYDRLVRAKT AIDPDNVFRN AQSIPPLGSR RMSRIPRGIS PKIASKDKTY DS

Best Arabidopsis Sequence Match ( AT1G30760.1 )
(BLAST)

001: MAFVLMNNTN AFLVTLLLLS LSYIPLSFST IQQDFVMCLV DNSDASFPMD SSFFTHDLNA SSFKLALETS AQNLRYLMPS NPKPEFIFEP LYETHVQAAV
101: LCAKKLKLHL RLRSGGHDYE GLSYVSEMET AFVIVDLSKL RQISVDIESN SAWVHAGASI GEVYYRIQEK SKIHGFPAGL CTSLGIGGHI IGGAYGSMMR
201: KFGLGADNVL DARIVDADGK ILNRAAMGED VFWAIRGGGG GSFGVILAWK IKLVPVPEIV TVFTVTRTLE QDGTKLLYKW QQVADKLDED LFIRVIIQPT
301: SKTPKSKERT ISTSYQGQFL GDANRLLQVM QRSFPQLGLT KKDCLETSWI KSVMYIAGFP STAPSEALLD GKSLFKNYFK AKSDYVEEPI PVEGLEGLWE
401: KLLEEDSPLT IWNPYGGMMA KIPETETPFP HRSGTLFKIQ WLTLWQDGKT SEAKHMGWMR EMYSYMEQYV SKSPRSAYVN YRDLDLGMNG KGSDAREWGN
501: RYFKGNFERL VEIKAKFDPE NFFRHEQSIP TELE

Arabidopsis Description

FAD-binding Berberine family protein [Source:TAIR;Acc:AT1G30760]
SUBAcon: [endoplasmic reticulum,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.